KEGG   Rhizoctonia solani: RhiXN_07732
Entry
RhiXN_07732       CDS       T09256                                 
Name
(RefSeq) Helicase associated domain (HA2)
  KO
K12820  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:5.6.2.6]
Organism
rsx  Rhizoctonia solani
Pathway
rsx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rsx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    RhiXN_07732
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rsx03041]
    RhiXN_07732
   03009 Ribosome biogenesis [BR:rsx03009]
    RhiXN_07732
Enzymes [BR:rsx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     RhiXN_07732
Spliceosome [BR:rsx03041]
 Complex A
  U2 snRNP components
   U2 related factors
    RhiXN_07732
 Complex B
    RhiXN_07732
 Complex C
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-SnRNP related factors
    RhiXN_07732
Ribosome biogenesis [BR:rsx03009]
 Eukaryotic type
  90S particles
   Helicases
    RhiXN_07732
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C DEAD HA2_N AAA_22 AAA_19 SRP54 nSTAND3 Flavi_DEAD Cas3-like_C_2 PhoH ABC_tran AAA_30
Other DBs
NCBI-GeneID: 67030011
NCBI-ProteinID: XP_043182933
UniProt: A0A8H8NZ07
LinkDB
Position
9:join(633132..633269,633321..633434,633528..633586,633635..633756,633828..633932,633987..634073,634162..634319,634371..634551,634608..634806,634862..634947,635003..635152,635202..635326,635384..635459,635515..635637,635697..635935,635981..636099,636154..636304)
AA seq 743 aa
MASAENRENPYLAHVKTVPPKAEGYEDPFDGCIPRKVKADKAKEILNGQYNPFTRQLYSE
KYKKILEGRKKLPVFAQMEEFYKIFNENQIVVMIGETGSGKTTQIPQFVAYTDIPHARGK
LIACTQPRRVAAMSVAKRVAEEMDVSLGKQVGYSIRFEDMTEPGTTFLKYMTDGMLLREA
MTDHDLSRYSTIILDEAHERTLATDILMGLLKEVARRRKDLKIVVMSATLDALKFQKYFS
TGGEGTIAPLLKVPGRTFPVETFYTQEPEPDYVEAAIRTVLMIHQAEDEGDILVFLTGEE
EIEDACRKIKIEAEGLSSGGKDGPGPLLVVPLYSSLPPAQQQRIFDAAPPGGRKVVVSTN
IAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCF
RLYTEKDYIKELEEQTYPEILRSNLANTVLELVKLGITDLVHFDYMDAPAPETIMRALEL
LNYLSALNDEGELTPLGGIMAEFPLDPQLAKMLIVSPEFKCSNEILTIVAMLSVPNVWLR
PNNQRKEADAAKSLLTVPDGDHLTLLNVYNNYYNNKDDKNWCWNNYLSQRALQQAENVRN
QLERSMERFDLDLVSIQDERKRSLGVRQALVCGFFMQVAHKGDKNTYTTVKDHQVVGLHP
SCGLDSTPEWVLFNEFVLTTRPFIRTVVEIRPEWLLEHAGMYYDLNTFPDSEAKRSLQRI
IKKKWANQTTESALESERAMTQV
NT seq 2232 nt   +upstreamnt  +downstreamnt
atggccagcgccgagaacagggagaatccgtaccttgcccacgtaaaaactgtgcctccc
aaggccgagggatacgaagacccctttgatggctgcatcccacgcaaggtcaaagctgac
aaggcaaaggagatcctgaatggacaatacaatccttttacgaggcaactatattctgaa
aaatacaaaaaaattctcgagggacgcaaaaagctgccggtgtttgcacagatggaggaa
ttctacaagatcttcaatgaaaaccagattgtcgttatgattggtgaaacaggttccgga
aagacaacacaaataccccaatttgttgcatacacggatattcctcacgctcgtggcaag
cttatcgcatgtacacagcctcgtcgagtcgctgccatgtcagttgcgaagcgtgtggct
gaggaaatggatgtttcgctcgggaaacaagtgggttattcgattcgattcgaggatatg
accgagccaggcaccacattcttgaaatacatgaccgatggaatgttacttcgtgaagca
atgaccgaccacgacctttcaaggtatagcacgattattctcgatgaggcccatgaacgc
actcttgctacagatattctcatgggcctccttaaggaagttgccagacgccgaaaagac
ctcaaaattgtggtcatgtctgccaccctcgatgcgctcaaattccagaaatacttctca
actggtggagaaggcaccattgctccactactcaaagttcctggacgaaccttcccagtc
gagactttctatacacaggagcctgagcctgactacgtggaagccgctatcaggacggtg
ctcatgattcatcaagcagaggacgagggcgatattttggtgtttttgactggtgaagaa
gaaattgaggatgcttgccgaaaaatcaagattgaggcagaaggtctgagttctggtggt
aaagatggacccggaccgcttcttgtcgtcccgctctattcatctctacctcccgcccag
caacagcgtatcttcgatgccgcaccgccaggcggccgcaaagttgttgtttcgacaaac
attgccgaaactagtttgaccattgatggtattgtgtatgtcgtcgatcctgggttctcg
aagcaaaaagtctacaaccctaggattcgagtcgagtccttgcttgtctctccgatctca
aaagctagtgcacaacaacgtgctggacgagcagggcgaacacggccaggcaaatgcttc
cgtttgtacactgaaaaggattacatcaaagaactcgaagaacaaacgtatccagaaatt
ctgcgctctaatctggcaaacactgtccttgaactggtcaagcttgggatcacagacctt
gtacatttcgactacatggacgcaccggcacctgaaacaatcatgcgtgcgctcgagcta
ttgaactacctctcagccctgaacgatgaaggcgaattaacccctcttggtggtattatg
gccgagttccccctggacccccagttggctaagatgttgatcgttagccccgaattcaaa
tgcagtaatgaaatcctgaccattgttgctatgctttcggtacctaacgtatggctccga
cccaacaatcagcgcaaagaagccgacgcagcaaagagccttctcaccgttccggacggt
gaccacttgactctcttgaacgtctataacaattactacaacaacaaggacgacaagaac
tggtgctggaataactacctctcccagcgtgcgctccaacaagccgaaaatgtgcgcaat
cagctcgaacgatcgatggagcgcttcgatttagacttggtctcgattcaagacgagcgg
aaaaggtctcttggcgttcgtcaagccttggtctgtgggttctttatgcaagttgcgcac
aagggcgataagaacacctataccaccgtcaaggaccaccaggtggttggacttcatcct
tcgtgtggtttggatagcacacctgaatgggtgcttttcaacgaattcgtattgaccaca
cgacccttcatccgaaccgtggttgagattcgacccgaatggttattggaacatgcagga
atgtactatgatttgaacacgttcccagatagcgaagccaaaagatctttgcaacggatt
atcaaaaagaagtgggcaaatcagacaacggagagcgctctcgaaagcgagagggcgatg
acgcaagtctaa

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