Rhizoctonia solani: RhiXN_07841
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Entry
RhiXN_07841 CDS
T09256
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
rsx
Rhizoctonia solani
Pathway
rsx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
RhiXN_07841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsx03019
]
RhiXN_07841
Messenger RNA biogenesis [BR:
rsx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
RhiXN_07841
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
67030120
NCBI-ProteinID:
XP_043183042
UniProt:
A0A8H8P0F4
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Position
9:complement(join(961610..961940,962029..962324))
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AA seq
208 aa
AA seq
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MYLQVPLQVPTLEFYVQVHTHTGAKPRLKLETDCVMVGDDSTKEAQPEEDPSVSARLQRL
QNNYEDFGMRRTVEGILVVHDHGHPHILMLQIANAFFKLPGDYLKPGEDETEGLKARLDE
RLAPLPGSAQHLGQDGDWEIGDCLAQWWRPNFETFMVSVDFREEGNMALSRVRGTIPTMD
SRELLNCAPCDSGLDPGGAFQLLLPSIS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgtacttacaagtacctttacaggtacccactctcgaattttacgttcaggtacatacc
catactggtgcaaaaccaagattaaaactcgaaactgactgtgtgatggtgggggacgac
agcacgaaagaagctcaaccagaggaagacccgtctgtctcggcgcgtcttcaacgacta
cagaacaactatgaggatttcggaatgaggcgtacggtcgaggggattctggtcgtacat
gaccacgggcacccacatatcctgatgttacagatcgcaaatgcctttttcaagttaccg
ggagactatctcaaaccgggagaagacgagacggaaggtcttaaagcccgactggacgaa
cgactcgcacctcttcctgggagcgcacaacaccttggacaggatggggattgggagatt
ggcgattgtttggctcagtggtggagacctaatttcgagacatttatggtgagtgttgat
tttcgagaggaggggaacatggctttgtctcgggtccgaggcaccatcccaacaatggac
tctagggaacttttgaattgcgccccttgcgactctggactcgatcctggaggggccttt
caactgctcctaccctcgatctcatag
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