Rhizoctonia solani: RhiXN_08408
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Entry
RhiXN_08408 CDS
T09256
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
rsx
Rhizoctonia solani
Pathway
rsx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
RhiXN_08408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsx03041
]
RhiXN_08408
Spliceosome [BR:
rsx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
RhiXN_08408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
Microcephalin
Ribosomal_L18_c
Motif
Other DBs
NCBI-GeneID:
67030687
NCBI-ProteinID:
XP_043183609
LinkDB
All DBs
Position
10:complement(join(726708..727137,727190..727403,727452..727773,727829..728326,728382..728636,728700..728729,728810..728816,728874..728929))
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AA seq
603 aa
AA seq
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MSKRPHEGGDSALAKKAKSDATPSASGGSGQLSADALIAAKRAEIAAKLAAFKKTQGGGS
SAPPAPASSIAAPIPNNLPPKPALPDKSDIAKKIEEAKRRVAEGVAKKAVQDNPYLSAAP
SKKKGAAPVEVVQQGSGLKMAAHPLLLDTAPTQLSQSKKDRYKPMLPKFASIKANVRNQP
SPSPAPTHTPTPTIERSTSATANPYASGGGAAGEDGTFEGATPAVKDRIGRSFRFNQKGK
YVAMGNQIRQDAQLEALKQKIAESARKAGLDSEFETLERNIRREAPPAVEWWDASLLPNK
TYDDLNPQSDSKEINLANTNIRSQDSPITMYVQHPIPVPAPWEKNQTELKPLKLTSKEAK
KLRRRRRMADLQEKQDRVRMGLLPPDPPKVRLANLMKVLTTDAVQDPTKVEARVRREVAA
RKVAHDKMNNERKLTDEQRREKVENKKAEEERKGLFVAVFKIKTLSDPSHRFKVRKNAEQ
YGLTGMCIFNPSFALVIVEGSHKAIKGYKRLMLVRIDWTQAAGARDVDEDAPPPKEDQDE
EGGPVSLENNRCDLVFEGPVREHNFQSFKPKRCPTDAMAKEALGTKAAPYWDTAKTFVED
VYS
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacgaccacacgaaggaggggactctgcgttagcaaagaaggccaaaagtgac
gcgacaccatcggcctcgggtgggtcagggcagctgtccgcagatgcactcattgctgca
aaacgcgccgaaattgcggccaagctggctgcgtttaaaaagactcagggcggaggtagc
tctgcccctcctgccccggcatcatccatcgctgcccccatacccaataaccttcctcct
aaaccggccctccccgacaaaagcgatattgccaagaagatcgaagaggcgaagagacga
gtcgcggagggtgtcgctaaaaaagcagtacaggataacccgtaccttagcgctgctccc
agcaagaaaaagggcgccgctcctgttgaagtcgttcaacaaggctctgggttaaagatg
gcggcccatcctctgttgctcgacacggcgccgacccaactttctcaatccaagaaggat
cgttacaagccgatgctgccgaagtttgcatctatcaaggccaacgtacggaatcaaccc
tctccatctcctgctcctacgcataccccaacacccacgatcgagaggtccacaagtgca
accgcgaacccatatgcctctggtggtggtgcagctggcgaagatggaactttcgagggt
gctacacctgctgtcaaggataggattgggcgtagtttccggttcaatcaaaaaggaaaa
tacgttgcaatggggaatcaaatccggcaagatgcacaattggaggcgttgaaacaaaag
atcgctgagagcgcgagaaaggctggcttggacagcgaattcgagacactcgagagaaac
attcgacgcgaagcacctcctgcagtggagtggtgggacgcatcccttcttccaaacaaa
acatacgacgacttaaacccccaatccgattctaaagagataaacttggccaacaccaac
attcgatcccaggactcacctatcacgatgtatgttcaacatcccattccggtacctgca
ccatgggaaaagaaccaaacagagctcaaaccgctcaagcttacgagcaaagaggcaaag
aaactccggcgtagacgacgcatggcggacttgcaagagaaacaggaccgtgttagaatg
ggtctcttgccacccgacccgcctaaagttaggttggccaatttgatgaaggtattgact
acggatgccgtccaagacccaacgaaggtcgaggctcgcgtcagacgtgaggttgctgcc
cgcaaggttgcacacgacaagatgaacaacgaacgcaaacttaccgacgaacaacggcgc
gagaaggttgagaacaagaaggctgaggaagagcgtaaaggcttatttgtggccgtgttc
aaaattaaaactctttcggatccctcccatcgcttcaaagtccgtaagaacgccgagcag
tatgggcttacagggatgtgcatattcaacccttcttttgctctggtcattgtcgaagga
tctcacaaggctatcaaaggctataagagactgatgcttgtccgtattgattggacccag
gctgccggtgcccgtgatgtggatgaagacgcaccccctcccaaagaggatcaggatgaa
gaaggcggacccgtctcgcttgaaaacaaccgatgtgaccttgtttttgaagggcccgtc
cgcgagcataatttccagagcttcaaacccaagcgctgcccgactgatgccatggcgaag
gaggcgttgggcaccaaggcggcgccttactgggatacagctaaaactttcgtggaagac
gtttactcgtaa
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