Rhizoctonia solani: RhiXN_08870
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Entry
RhiXN_08870 CDS
T09256
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rsx
Rhizoctonia solani
Pathway
rsx00040
Pentose and glucuronate interconversions
rsx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
RhiXN_08870
Enzymes [BR:
rsx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
RhiXN_08870
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
67031149
NCBI-ProteinID:
XP_043180132
UniProt:
A0A8H8NV39
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All DBs
Position
5:join(224093..224220,224274..224834,224886..224957,225019..225208)
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AA seq
316 aa
AA seq
DB search
MRFAIVSVSVLAALSQLVSAVPTLERRASATEKPTIGYAAQGSTTGGIGGSTITVTSLAA
LTSAVASDSAKIVIVSGTITGNTVVKVGSNTSLLGKSGSSLVGVGLRVNKKNNVIIRNLK
ISKVLASAGDALGIQEASKVWVDHVDLSSDRDHDKDFYDGLLDVTHGSTFVSITNSNLHD
HYKASLVGHSDNNESEDKKITVTYALNRFSNLNSRMPSFRFGTGHLFNNYFVNSNDGINT
RLGAQLLVENNVWEGVKKPLYATDNGFAVARGNDFGGASNSAPTGTFSKAPYSYTLLDAG
KVKSTVSSSAGATLDF
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcgccattgtctctgtttctgtcctcgctgcgctttcgcagctcgtatctgcc
gtccccacactcgagcgccgtgcaagcgccaccgagaagcctaccatcggatatgctgcc
cagggcagcaccaccggtggcattggcggctccaccatcaccgtcacctccctcgccgcc
ctcacctccgccgtcgcttccgacagcgcaaagatcgtcatcgtgtccggcaccatcacc
ggcaacaccgtcgtcaaggtcggctccaacacctccctcctcggcaagtccggctcgtcg
ctcgtcggtgtcggactgcgcgtcaacaagaagaacaacgtcatcatccgcaacctcaag
atctccaaggtcctcgccagcgccggcgacgctctcggcatccaggaggcgtccaaggtc
tgggtcgaccacgtggacctgtcgtccgaccgcgaccacgacaaggacttctacgacgga
ctgcttgacgtcacgcacggcagcaccttcgtgtcgatcacgaactcgaacctgcacgac
cactacaaggcgtcgctggtgggacactcggacaacaacgagtcggaggacaagaagatc
acggtgacgtatgcgctgaaccggttctcgaacctgaactcgcgcatgccgtcgttccga
ttcggtaccggacatctgttcaacaactacttcgtgaactcgaacgacggcatcaacact
cgccttggtgctcagctgctggtcgagaacaacgtatgggagggtgtgaagaagcctctg
tacgcgaccgacaacgggttcgcggtcgcgcgcggaaacgactttgggggtgcatcgaac
agcgctcctaccggcacattcagcaaggctccgtacagctacactcttctggatgcgggc
aaggtcaagtcgacggtgtcgtcgtctgctggtgcgacgctcgacttctga
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