Rhizoctonia solani: RhiXN_08872
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Entry
RhiXN_08872 CDS
T09256
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rsx
Rhizoctonia solani
Pathway
rsx00040
Pentose and glucuronate interconversions
rsx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
RhiXN_08872
Enzymes [BR:
rsx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
RhiXN_08872
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
67031151
NCBI-ProteinID:
XP_043180134
UniProt:
A0A8H8NW97
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Position
5:complement(join(230870..231059,231121..231192,231244..231804,231858..231985))
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AA seq
316 aa
AA seq
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MRFAIVSVSVLAALAQLVSAVPTLERRASATEKPTIGYAAQGGTTGGIGGSTITVTSLAA
LTSAVADDKAKIVYVSGTITGNTVVKVGSNTSLLGKSGSSLVGVGLRVNRKNNVIIRNLK
ISKVLASAGDALGIQEASKVWVDHVDLSSDRDHDKDFYDGLLDVTHGSTFVSITNSNLHD
HYKASLVGHSDNNESEDKKITVTYALNRFSNLNSRMPSFRFGTGHLFNNYFVNSNDGINT
RLGAQLLVENNVWEGVKKPLYATDNGFAVARGNDFGGASNSAPTGTFSKAPYSYTLLDAG
KVKSTVSSSAGATLDF
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcgccattgtctctgtttctgtcctcgctgcgcttgcgcagctcgtatccgct
gttcccacactcgaacgccgtgcaagcgccaccgagaagcctaccatcggctatgctgcc
cagggcggcaccaccggtggtatcggcggttccaccatcaccgtcacctccctcgccgcc
ctcacctctgccgttgccgatgacaaggcaaagatcgtctacgtatccggcaccatcacc
ggcaacactgttgtcaaagtcggctctaacacctccctcctcggcaagtccggctcgtcg
ctcgtcggcgtcggactgcgtgtcaacaggaagaacaacgtcatcatccgcaacctcaag
atctccaaggtcctcgccagcgccggcgacgctctcggcatccaggaggcgtccaaggtc
tgggtcgaccacgtggacctgtcgtccgaccgcgaccacgacaaggacttctacgacgga
ctgcttgacgtcacgcacggcagcaccttcgtgtcgatcacgaactcgaacctgcacgac
cactacaaggcgtcgctggtgggacactcggacaacaacgagtcggaggacaagaagatc
acggtgacgtatgcgctgaaccggttctcgaacctgaactcgcgcatgccgtcgttccga
ttcggtaccggacatctgttcaacaactacttcgtgaactcgaacgacggcatcaacact
cgccttggtgctcagctgttggtcgagaacaacgtatgggagggtgtgaagaagcctctg
tacgcgaccgacaacgggttcgcggtcgcgcgcggcaacgactttggaggtgcatcgaac
agcgctcctaccggcacattcagcaaggctccgtacagctacactcttctggatgcgggc
aaggtcaagtcgacggtgtcgtcgtctgctggtgcgacgctcgacttctga
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