Rhizoctonia solani: RhiXN_08880
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Entry
RhiXN_08880 CDS
T09256
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rsx
Rhizoctonia solani
Pathway
rsx00040
Pentose and glucuronate interconversions
rsx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
RhiXN_08880
Enzymes [BR:
rsx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
RhiXN_08880
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
67031159
NCBI-ProteinID:
XP_043180142
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Position
5:join(252997..253124,253178..253738,253790..253861,253923..254112)
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AA seq
316 aa
AA seq
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MRFSVVSVSVLAALAQLVSAVPTLERRASATEKPTIGYAAQGGTTGGIGGSTITVTSLAA
LTSAVADDKAKIVYVSGTITGNTVVKVGSNTSLLGKSGSSLVGVGLRVNKKNNVIIRNLK
ISKVLASAGDALGIQEASKVWVDHVDLSSDRDHDKDFYDGLLDVTHGSTFVSITNSNLHD
HYKASLVGHSDNNESEDKKITVTYALNRFSNLNSRMPSFRFGTGHLFNNYFVNSNDGINT
RLGAQLLVENNVWEGVKKPLYATDNGFAVARGNDFGGASNSAPTGTFSKAPYSYSLLDAG
KVKSTVTSSAGATLNF
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttctctgtcgtctctgtttctgtcctcgctgcgcttgcgcagctcgtatccgct
gttcccacactcgagcgccgtgcaagcgccaccgagaagcctaccatcggatatgctgcc
cagggcggcaccactggtggtatcggcggctccaccatcaccgtcacctccctcgccgcc
ctcacctctgccgttgccgatgacaaggcaaagatcgtctacgtatccggcaccatcacc
ggcaacactgttgtcaaggtcggctccaacacctccctactcggcaagtccggctcgtcg
ctcgtcggcgtcggactgcgcgtcaacaagaagaacaacgtcatcatccgcaacctcaag
atctccaaggtcctcgccagcgccggcgacgctctcggcatccaggaggcgtccaaggtc
tgggtcgaccacgtggacctgtcgtccgaccgcgaccacgacaaggacttctacgacgga
ctgctcgacgtcacgcacggcagcacgttcgtgtcgatcacgaactcgaacctgcacgac
cactacaaggcgtcgctggtgggacactctgacaacaacgagtcggaggacaagaagatc
acggtgacgtatgcgctgaaccggttctcgaacctgaactcgcgcatgccgtcgttccga
ttcggtaccggacatctgttcaacaactacttcgtgaactcgaacgacggaatcaacact
cgccttggtgctcagctgctggtcgagaacaacgtatgggagggtgtgaagaagcctctg
tacgcgaccgacaacgggttcgcggtcgcgcgcggcaacgactttggaggtgcatcgaac
agcgctcctaccggcacgttcagcaaggctccgtacagctacagtcttctggatgcgggc
aaggtcaagtcgaccgtgacctcgtccgctggtgccaccctcaacttctga
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