Rhizoctonia solani: RhiXN_09212
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Entry
RhiXN_09212 CDS
T09256
Name
(RefSeq) Elongation factor Tu GTP binding domain
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
rsx
Rhizoctonia solani
Pathway
rsx03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
RhiXN_09212
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsx03009
]
RhiXN_09212
Ribosome biogenesis [BR:
rsx03009
]
Eukaryotic type
Pre-60S particles
GTPases
RhiXN_09212
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
GTP_EFTU_D2
EF-G_D2
EFG_IV
MMR_HSR1
Septin
Motif
Other DBs
NCBI-GeneID:
67031491
NCBI-ProteinID:
XP_043180474
UniProt:
A0A8H8NY85
LinkDB
All DBs
Position
5:complement(join(1258169..1258683,1258752..1258880,1258938..1259134,1259188..1259605,1259663..1259759,1259812..1259933,1260175..1260938,1260990..1261597,1261656..1261795,1261846..1262051,1262101..1262132))
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AA seq
1075 aa
AA seq
DB search
MDNEAGGDNIRVITTIGHVDHGKTTFVDSLLAANNIISARMAGKIRYMDSREDEQERGIT
MESSAVSLRFKMMKRSAAGTPEAENFVINLIDTPGHVDFSSEVSSASRLCDGALVLVDVV
EGVCSQTITVLRQAWVDRLRPVLVVNKFDRLILELKLSPFEAHHHLTQLIEQVNAVMGSF
HAAERMEDDLRWREERERRLQARKEAGAESAENDANAGIEGADTSAEAVYQEKDDEDLYF
APEKGNVIFASAIDGWGFRVSRFAQMYAAKLGIKEGNLRRVLWGDFYLEPKTKRVISYKH
LRGRNLKPLFVQFVLENIWAVYDSVVMNPNPDKVTKICSTLDVKVTPRDLKSKDTRQLAA
SVMSQWLPLATCTFSTVVDAIPPPHKAQGVRVSRMLHPDQDSDSLEPHNKLESDLYTCST
DAEACVVAYVSKMFAVPTKDLPANKKKEMTADEMRARGRAAREARAAAGVGDTIVEEAKP
VDSGEHTVVETKPGALDGLVEEDETLIGFARLFSGVLRPGATVYCALPRFDNQKPNASTL
RTVKVGLLFTMMGRDLVPVNEVRAGNVFAISGLEGVVWRNATLSDLPKLIRGLKLLSQAD
PCVESFQQQTGEWVILTAGELHLERCLKDLRERFAKIDVQASKPIVPFRETAVKAPDMPP
PKSQSAVRGTIHGSSAHGAVTFTIRAAPMPNSITDFLQANVSVMRKWLREGRVKNESEST
EFVEQGKAVTEEDVTADADSSQVATVKDVDFWPAFEKLCAEAGKEWTDLPGRIVATGPHH
AGPNVLVGGTASGITSLQSRTDPRWKSQTKPEDAPTKKVYRDYEDSIDTGFQIATFQGPL
CAEPVMGMAYFLEDVKQNPDATHTQPGQITGSMISAVRDACRAGLLDWSPRLKLAMYTCD
IQATTEVLGKVYGVVARRRGRIVSEEMKEGSIFFTVEALLPVAESFGFADGLWPPHSCLS
VLTNRPSFIQNCVGERQALQVRSLFSAGKSGGDPGPSFGLVPGCSALTGELIYRYELFDQ
DPFWVPTTEEELEDLGEKADRANVALGYVNAVRKRKGLFVEEKKFEAEKQRTLKK
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggacaacgaagccggaggtgataacattcgggtcattaccacaatcgggcacgtcgat
catggaaagactacattcgtcgactccctcttagcagcaaacaatatcatttctgctcgg
atggccggaaagatccgatacatggatagtagagaggacgaacaagagagaggaattacg
atggagagtagcgctgtgtcgctgagattcaaaatgatgaagcgttcggctgccggaact
cccgaggccgagaacttcgttatcaatctaattgatacacctggccatgttgacttttcg
agtgaagtctcttcggcctctcgtctatgcgatggtgctctagtcttggtagatgtagtc
gaaggggtctgttcacagactattacggtgctgcgccaagcatgggtcgatcgtttacgt
cctgtcctggtcgtcaacaaattcgatcgcctaatcttggaactcaaattatccccgttc
gaagctcatcaccatctcacacaattgatcgagcaggttaacgctgttatgggcagcttc
catgctgcagagcgtatggaagacgatctgcggtggcgcgaggaacgtgagcgccgctta
caggcacggaaagaggctggtgcggagagtgccgagaacgatgcgaatgcggggatcgag
ggggccgatacgagtgcggaagcagtctatcaggaaaaagacgatgaggacctatatttc
gcgcctgagaaaggtaatgttatattcgcctcggcgatagacggatggggtttccgggtg
tccagatttgcgcagatgtatgctgccaaacttgggataaaggaaggcaatttgcgaaga
gtcttgtggggagatttctatcttgagcccaagaccaagcgagtcattagctacaagcat
ctgcgcggccggaatctgaagcccttgtttgtgcaatttgtgctcgaaaatatatgggct
gtgtacgatagcgtggtcatgaacccgaatccggataaggtgacaaagatttgcagcacc
ctcgacgttaaagttacgcctcgagaccttaaatcaaaggatactcgtcaacttgcagca
tctgttatgtcgcaatggctacctttggcaacttgtacattttcaactgtggttgatgcc
ataccacccccacacaaggctcaaggagtccgtgtatctcgcatgcttcaccctgatcaa
gactccgattctctggaaccccataacaaacttgaaagcgacttatacacatgttcaacg
gacgccgaggcatgtgtggtcgcgtatgtgagtaaaatgtttgccgtaccaacaaaggac
ctgccggccaacaagaagaaagaaatgactgccgatgagatgcgtgcccgaggtcgtgct
gccagagaggcccgcgctgctgctggagtgggagatactattgtcgaagaggctaagccg
gtggattcaggggagcatacggtcgtggaaaccaagccgggtgcgcttgatgggctcgta
gaagaggacgagacattgattggattcgctcgccttttctctggcgtccttcgaccgggt
gctaccgtctattgtgctcttcctaggttcgataatcaaaaacctaacgcatccacgttg
cggacagtcaaggttggcttactatttactatgatgggtcgggaccttgtccctgtcaac
gaggtgcgagctgggaacgtgtttgctatctctggcctggagggggttgtctggcgcaat
gctacgctttccgatttaccaaagctcattcgaggactaaagcttctcagtcaggctgac
ccttgcgttgaaagcttccagcagcagacaggagaatgggtgattctcaccgcgggagag
ttgcatctggagcgatgtttgaaggacctgagagagcgctttgcaaagattgatgtccaa
gcttccaaaccgatagttccattccgagaaactgcggttaaagctcccgatatgcctccc
ccaaagtctcagagcgccgtgcggggaactattcatggttcgagtgctcatggcgcagtc
acatttactattcgggctgcaccaatgcccaatagcattacagatttcctccaagccaat
gttagcgttatgcgcaaatggctaagagaagggcgtgtcaaaaacgaatccgagtcgaca
gaatttgttgagcaaggcaaggcagttacggaggaagacgtgaccgccgatgcggactct
tcccaggtcgcgactgtcaaggacgtagatttctggccagcctttgagaaactatgcgca
gaagctgggaaagaatggacagatctacctgggcgtatcgttgcgactgggcctcatcat
gctggtccgaatgtacttgtgggcgggacagcttccggtattacttcactccagagtcgt
acagatccgcgctggaagtctcaaaccaaacctgaggacgcacctaccaaaaaggtctat
cgagattatgaagatagcatcgatacaggatttcagattgccaccttccaaggcccattg
tgtgcggaacccgtcatgggtatggcttatttcctggaagatgtaaaacaaaacccggac
gctacgcatacacaacctggacaaatcacgggctcgatgatctccgccgttcgcgatgct
tgccgcgctgggctattggattggtcaccccggcttaagctcgccatgtatacatgtgac
atccaagccacgacggaggttcttgggaaagtgtatggtgttgtcgcccgccgacgtggc
cgcatcgtttcggaagaaatgaaggagggctcgatcttcttcactgtcgaggcgctcctc
cctgtcgctgaaagttttggatttgctgatggtctgtggcctccacattcgtgtttgtct
gtgttgaccaatcgcccatctttcatccagaattgcgtgggcgaacgtcaggcgctgcaa
gtccgcagcttattttcagcgggtaagtccggtggcgaccctggacctagctttggtcta
gttcctggatgctcggcgctcacgggcgagctgatctacagatacgagctattcgaccaa
gacccattctgggtcccaaccaccgaagaggaactcgaggaccttggtgaaaaggcggac
cgggccaacgttgctctcggatatgtgaatgccgtgaggaaacgcaaaggtctgttcgtg
gaggaaaagaagttcgaggcggaaaagcagaggacactcaaaaagtaa
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