Rhizoctonia solani: RhiXN_09429
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Entry
RhiXN_09429 CDS
T09256
Name
(RefSeq) rhamnogalacturonate lyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
rsx
Rhizoctonia solani
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
RhiXN_09429
Enzymes [BR:
rsx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
RhiXN_09429
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GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
Motif
Other DBs
NCBI-GeneID:
67031708
NCBI-ProteinID:
XP_043180691
UniProt:
A0A8H8SWE1
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Position
5:complement(join(1961368..1961495,1961554..1961570,1961622..1961822,1961871..1961951,1962006..1962024,1962084..1962094,1962156..1962606,1962662..1962688,1962736..1962802,1962869..1962999,1963077..1963200,1963253..1963413,1963466..1963592))
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AA seq
514 aa
AA seq
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MNWKSAIALAFAACTPGVLAAFGVTTGSGYLSVDTGGGLVFRVSTSSGDITSLKYNNIEC
QDSSKYTHIGSGLGSATVSYKISGNYATITIATSTLTQYYVAVSGQSAIYIGTYTTAEPS
VGELRFIARLSKSALPKGGTAIEGSDVYSLNGQTRSKFFSSVQFIKDQVHGVTGNGVGVY
MVMPGNAYETSGGGPFFRDINNQGSSQQELYWYMNSGHMVTQSFRTGFFGPYAMVFTSGN
APSASLDTSFFANLGIKGYVAASGRGTVKGTVSGVPSGFTAVVGLDNSAAQYWGTVSGTS
YTINGVKPGTYKATLYKKELEVGTGSVTVSAGGTATLNLASTESIKSNIWQIGLPDGTPS
GFLNADKIESMHPTDSRMSGWGPVTYTIGSSSPSSFPMAQFVAVNNPTTIKWTATSSQIG
ARTLRIRTTSSFAGGRPAIKVNNWSSANPAAPTKIDSRGVTRGTWRGYNQLYEYAIPSGT
LVAGSNTITISVISGSSGDAFLSPNVVYDSVELY
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgaactggaaatcggctattgcgctcgcctttgcggcttgtactcccggtgtcttggcc
gcctttggcgtgaccaccgggtctggataccttagtgtcgacaccggaggaggactcgtc
tttcgggtgtcaacatcgagtggagatattacctcgttaaaatacaataatatcgagtgc
caagactcttcaaaatacactcatatcggctctggtctgggttccgccacagtctcttac
aagatttctggaaattatgcgaccatcacgattgcgactagcactttgacacaatattat
gtcgctgtaagcggacaaagcgcaatttacattggtacctatacgacggctgaaccaagt
gtaggagagctgcgctttattgcccggctctccaagtccgcacttcccaaaggcggtacg
gctatcgaaggaagcgatgtatactcgctcaatggccaaacacgctccaaattcttttcc
tcggttcaatttatcaaggatcaagttcacggtgttaccggaaatggtgtcggtgtctac
atggtcatgccgggtaatgcttatgaaacttcgggtggaggacctttcttccgcgatatc
aataaccaaggatcttcccagcaggaactttactggtatatgaactctggacacatggtc
acccagagcttccgaactgggttctttggaccatatgctatggtcttcacctcgggcaac
gcaccttctgcctctctcgatacctctttcttcgcgaaccttggtatcaagggatacgtt
gctgcctcgggtcgtggcactgttaagggcactgtctctggtgtcccatctggttttacc
gcagttgttggtctagataattccgccgctcaatactggggaaccgtctcaggaacctct
tacacgatcaatggtgtcaagcccggaacttataaggcaactttgtacaagaaagagttg
gaagttggaactggatcggtgactgtaagcgccggtggaactgcaacgctaaacctagct
tcgacggagagcatcaaatcgaatatctggcagattggactgccggacggcaccccctct
ggatttttgaatgctgataagattgaatcaatgcacccgaccgattcacgtatgagcggc
tggggtcctgtgacgtataccatcggaagctcttccccatcctcattccccatggcacaa
tttgttgcagttaataatcctacgaccatcaaatggaccgccacttcgtctcaaattggc
gcccgtaccttgcgaattcgaacaacttcgtcctttgccggtggacgtcccgcaatcaag
gttaacaactggtcttctgcgaatcccgcggcgcctactaagattgattcccggggtgtg
acacgaggcacgtggagaggatacaaccaactttacgaatacgctattccctctggtact
ctcgttgctggctcaaatactattacgatctccgttatcagcgggagcagtggagatgca
ttcctttccccgaatgtcgtctatgactcggtggagctttattag
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