KEGG   Rhizoctonia solani: RhiXN_10012
Entry
RhiXN_10012       CDS       T09256                                 
Name
(RefSeq) UvrD-helicase domain protein
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
rsx  Rhizoctonia solani
Pathway
rsx03420  Nucleotide excision repair
rsx03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rsx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    RhiXN_10012
   03430 Mismatch repair
    RhiXN_10012
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rsx03400]
    RhiXN_10012
Enzymes [BR:rsx01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     RhiXN_10012
DNA repair and recombination proteins [BR:rsx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     RhiXN_10012
   MMR (mismatch excision repair)
    Other MMR factors
     RhiXN_10012
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 ADDB_N AAA_11
Other DBs
NCBI-GeneID: 67032291
NCBI-ProteinID: XP_043182662
UniProt: A0A8H8P138
LinkDB
Position
8:complement(join(1822148..1822225,1822297..1822376,1822423..1822505,1822566..1822623,1822677..1822743,1822795..1822864,1822914..1823071,1823121..1823285,1823336..1823535,1823589..1823762,1823822..1823911,1823965..1823994,1824053..1824073,1824124..1824218,1824280..1824654,1824708..1824776,1824834..1825077,1825132..1825246))
AA seq 723 aa
MKRRLEIGLMRRYSTSMNIPRQMAIKNHLEGLNGPQRQAVMFPPNSPLQILAGPGTGKTR
VLTSRLANLVLNHSYLPSSICAVTFTRKASKEMKARLYQYLDSNATEDIKLGTFHSVCLN
YLRSYGTMVHVEPGFLVWDEDECILVLRHLSEKAGKDLTKDFLAKELYEMFSNVKEKVKI
TPGAAIDSMIKEELKRKREDHNSSAHDSPQIQLQSKLLLELYYSYSHTLRASNALDFTDL
LSKGLDLLQAVPWAREVGRLKHVLVDEFQDTSSLQYLIVKELFKATRGSISVVGDPDQSI
YKWRGADDTVFRQMKKDLPKTKEIYLEENYRSTASIIKTAIDIISQDETRPPKALFTSYT
PHGPKPVKKSLDIKHEEEAYIVEEINRIVTNSAETIDYGDCAILFRDNRSADQFSQVLFK
AGIPYRQLPEPSLMEQFEVISLIAFLRLAINDAHTPMVIRALKGPLALDEKAITDLMTRS
AGHRITLFDALQRVRGGYDRDTNPSCISASNLLTRILRHLRDFMHQGASPADLLHYIIEA
TNYHEFLMQNFTKNYSRRARNVQRTIQYAKLFKGKKELGPMPVRLFLDFMRELSRVDDFN
TGKVTLLTCHSAKGLEWPVVFVPSVVDGVYPHHKSQSISIDEERRLLYVACTRAQCLLYL
TRSETKLINQRALTIFATTGIPVEVQQYESEFTEHLLPETYQDEAPTMDTKALDLFRKIL
GRN
NT seq 2172 nt   +upstreamnt  +downstreamnt
atgaagaggcgactagagattggactcatgcgcagatattccacttctatgaatattcct
cgtcaaatggcgataaaaaaccatctagaaggtttgaatggacctcagcgtcaagcggta
atgtttccgccaaacagcccacttcaaatacttgccggacccggcactggaaaaacaaga
gttctgacttcacgcctggctaatctcgttctcaatcattcgtatcttccgtcatcaata
tgtgccgttacattcacgagaaaagcttcaaaagaaatgaaagcaaggctatatcaatac
cttgattcaaatgccactgaagacattaagcttgggacttttcatagcgtttgtttaaac
tatctgcgcagctacgggaccatggtccacgtagaaccaggttttttggtctgggatgaa
gacgaatgtatcctggttctccggcatctttcagaaaaagcaggcaaagatcttacaaag
gattttttagctaaagaattatacgaaatgttttcaaatgtgaaagagaaggtgaaaatc
accccgggcgctgcaatagattccatgataaaagaagagctcaagcgaaagagagaagac
cataacagctcagcccacgatagccctcaaattcagctccaatcaaagcttctccttgag
ctctattattcctattctcatacgctgagagcttccaacgcacttgatttcacagacttg
cttagcaaagggctggatctacttcaggctgtaccttgggcaagggaagtcggtcggttg
aagcatgtgcttgtagacgaatttcaggatacaagctcacttcaatatctgatcgttaag
gagcttttcaaggccaccagagggtcaataagtgtggttggcgaccccgaccagtcgatt
tacaagtggcgaggagcagatgatactgtttttcgacaaatgaagaaagacctcccgaaa
acgaaggagatataccttgaagaaaactatcgatcaaccgcctcaatcattaaaactgca
atcgatatcatttcccaagacgagacaagaccacctaaagctctttttacatcttacact
ccccatggccccaagcccgtaaaaaaaagcctcgacatcaaacatgaagaggaggcttat
attgtcgaggaaattaatcgcatagtcacgaactctgctgaaactattgattacggagat
tgcgccattcttttccgggacaaccggtcagcagatcagttttctcaagtattgttcaag
gctggcatcccatatcgacaacttcctgagccgtcattaatggagcaatttgaagttata
agtctgattgcatttctacggctcgcaatcaacgatgcgcatactccaatggtaatacga
gcactgaaagggccgcttgcgcttgatgaaaaggctattacggatcttatgactcgctct
gccgggcatcgtattaccttgtttgatgccttgcaacgcgttcgaggtggttatgaccgg
gatactaatccatcttgcataagcgcctcaaatcttttgaccaggatacttcgtcatctt
agagacttcatgcatcagggggcgagcccagcagatctgcttcattatatcattgaggct
accaattaccacgaatttctcatgcaaaactttacgaagaattactcccggcgtgctcgg
aatgtacagcgaactatacagtatgctaagcttttcaaagggaaaaaagaacttgggcca
atgccagtacgattgttccttgatttcatgagggaattgtctcgagtcgatgatttcaat
accgggaaagtgactctcttgacttgtcattctgcaaaaggactcgagtggcccgtggtt
ttcgtcccaagtgttgttgatggtgtataccctcatcacaagtcgcagtcaattagcatc
gacgaggaacgacgacttctctatgttgcctgcactcgggctcaatgtttactataccta
actcgctcggagacaaaattgatcaaccaaagggccctaacaatctttgcaaccacaggc
atcccagtggaagtacaacaatatgagtctgagttcactgaacatctattgccagaaacg
taccaagatgaagcgcccacgatggacacaaaagctctcgatctattcagaaaaatcctc
gggcgtaactag

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