Rhizoctonia solani: RhiXN_10313
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Entry
RhiXN_10313 CDS
T09256
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
rsx
Rhizoctonia solani
Pathway
rsx00040
Pentose and glucuronate interconversions
rsx01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
RhiXN_10313
Enzymes [BR:
rsx01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
RhiXN_10313
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
67032592
NCBI-ProteinID:
XP_043184226
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All DBs
Position
11:join(859200..859275,859336..859405,859459..859541,859597..859685,859738..859836,859892..859900,859955..860022,860079..860177,860235..860246,860305..860361,860415..860493,860544..860599,860652..860741,860796..860865)
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AA seq
318 aa
AA seq
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MLVFQLTVSLLAGLASAVSIKRAAPVDGITGYATQNGGTTGGAGGTTTTVTTLAALRAAV
TGESAKIVKISGIITGDGEVVDVGSKTTILGVGSNSGLTGGGFRVKKANNVIIRNLRLSK
SPAPTDLILLQEASNVWIDHNTFSSDLDHDKDYYDGAFDVSHGSDFVTASWNVFTNHFKT
SLVGHSDKNSAEDSGHLRVTYHHNYFLNVNSRLPSLRFGTGHIYNNYYKNVATSGVDSRL
GAQVLVESNVFDTVTSPIATKLHGGYAVQRDNVLINTTMNTDLVAGTLTTAPYTYSLDAS
NTVAATVTKSAGAGVITF
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgttggtctttcaattgactgtttcgcttcttgctggcctcgcaagtgccgtttctatc
aagagggcagcacctgttgacggaatcactggatacgccactcagaatggtggaactact
ggaggtgccggaggaaccacaaccactgttaccactcttgctgctcttcgtgcagctgtc
acaggagaatccgccaaaattgttaagatttcgggtatcattactggagatggggaggtc
gttgatgtcggaagcaagactacgattctaggagttggttcgaattctggccttactggg
ggcgggttccgcgtgaagaaggcaaacaacgtgattattcggaacctacgactttcgaag
tcccctgctcctacagacttgatcttattgcaggaagcatcaaatgtgtggatcgatcat
aatactttctcttccgacttggatcacgataaggattattacgatggagcttttgacgtt
tctcatggaagcgattttgtcactgcatcttggaacgtgttcaccaaccatttcaagaca
tcgcttgttggtcactctgataagaactcggctgaagattcaggccacctccgtgtaact
taccaccacaactatttcctcaacgtcaactctcgtttgccctcgctccgcttcggtact
ggccacatttacaacaattactacaagaacgttgctacctcaggagtagattcgcgcctt
ggggcacaagttcttgtcgaatctaatgttttcgacactgttacttcaccgattgccact
aagcttcacggtggatacgctgtccaacgtgacaacgttttgattaacacaacaatgaat
actgacctcgttgccggtacactcaccacagccccttatacctattctcttgatgcttca
aacaccgttgctgccacagtaaccaagagcgccggagccggagttatcactttctaa
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