KEGG   Rhizoctonia solani: RhiXN_10469
Entry
RhiXN_10469       CDS       T09256                                 
Name
(RefSeq) pectate lyase
  KO
K10877  DNA repair and recombination protein RAD54B [EC:5.6.2.-]
Organism
rsx  Rhizoctonia solani
Pathway
rsx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rsx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    RhiXN_10469
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rsx03400]
    RhiXN_10469
DNA repair and recombination proteins [BR:rsx03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Rad54 family proteins
     RhiXN_10469
SSDB
Motif
Pfam: Pectate_lyase SNF2-rel_dom Helicase_C ResIII HDA2-3
Other DBs
NCBI-GeneID: 67032748
NCBI-ProteinID: XP_043184382
UniProt: A0A8H8P2R0
LinkDB
Position
11:complement(join(1399627..1399629,1399685..1399811,1399872..1399937,1399989..1400092,1400142..1400185,1400242..1400369,1400432..1400589,1400641..1400747,1400802..1400829,1400881..1401005,1401062..1401093,1401146..1401166,1401220..1401270,1401324..1401395,1401445..1401470,1401527..1401612,1401939..1402009,1402056..1402130,1402177..1402355,1402417..1402486,1402539..1402636,1402716..1403003,1403061..1403130,1403182..1403280,1403337..1403620,1403682..1403748,1403797..1403858,1403911..1404214,1405248..1405527,1405581..1405768,1405847..1405946,1406020..1406194))
AA seq 1195 aa
MVHISFATLTVIAGVLAQTALAAPSEKRAASCSFPNPSSSTDVKFDAARTIKAGESFDGK
NLRYHRGVTCGGQKEGGDKDAVFLLESGATLSNAVIGKNQNEGVHCKGPCTIRNVWFEDV
CEDAITIRQSSGTTTITGGGAKNADDKVIQHNGGGLVKIDSYCVQDFGKLYRSCGNCSTQ
VKREVQISNIIARNGKVLAGVNSNYGDVATIDTKTNSYTSVKSICNTYQGNDKSQEPPML
TENKSNANNHFAKPSVPRDITHVPGADDRNSNAPSRHHYTMLSLHPNEKLEKARSPMGRA
KEEPNSANTSYAKKIYYQVLWFVASDLVWTTTDGEMQESPQTKKHKTWDGDGVIVITGST
YELLDEEAKTLGSGKILGELVEGAEIKLGGREVQIEREVPATEFLSGKIFGGNASSYQPA
AKSVTLNPRQSGFVAPKFNTPRLSNAAKAIPDAKGKGVDRTNTQAKPAAAPPQSVVSAAG
LYWTANWRRPQARKHKVWEGSGAISLADGQLKLVNEEGHTVGVKAWKGDPPDFGDVIIVG
GHEAEIDAPLSSVEYAASFRPPTVRVVSVEGTGEDAIDGAPAAEIDLTYECPRSRANLLP
RMAQLALYWAPLSKFSINATRKPTNRAFRPPTMKTVETGAQTTDQETQIMGRLGIVELTN
NTMKLYNDKGRLLKTMRWKSEVPLTGVTFSIDNLEVELQTPVPMEDLESKTCFEPGYSPP
GTSTSLAPIAANSTYVAPRSFYAAPEKKEKPPGPLYDPDADGALVMPTPNEAHQKKYNTK
NLPVVPVVVDPMLTKFLRPHQREGQNPYYSPSGAVPGVIGKALIVCPVSLVNNWRKEFIK
WLGRDRLRVFVGDKDKNNIKQFMNSRIHHVLIIGYEKLRTVIDDLTYCTPPIGLIVCDEG
HRLKSAQAKTTKMFEALKRTPRRIILSGTPIQNDLGEFHAMADFCNSGMLEEYPRFRRIY
ETPILKSRSPEASAKDIELGAARAAQLNELAKSFVLRRTADILTNYLPPKTEYVLFVQPT
ALQLSVFQKILRPTMFKICPIMLAKPDKGAGAENGKTTRTLVQEALGLLPPGAAPDDITL
SGKLIALATLLKQLRQTTEEKCILVSHYTSTLNIVEAYCRSVYYTYSRLDGSTAVTKRQQ
LVDEFNQAKQSKIFISPERESGRRWAEFNWCFPVNPNRQRLESFPRPTVDGSDSS
NT seq 3588 nt   +upstreamnt  +downstreamnt
atggttcatatctctttcgctaccttgaccgtcatcgccggcgtccttgcccaaaccgcg
ctcgctgcaccttctgaaaaacgggcagccagctgctcgttcccgaacccatcttcatcc
accgacgtcaagttcgatgccgctcgcaccatcaaggccggcgagtcctttgacggcaag
aacctccgctaccaccgcggtgtcacatgcggtggccagaaggaaggtggcgacaaggat
gctgtcttcctgctcgagtccggcgctaccctatccaatgccgtgatcggcaaaaaccaa
aacgagggcgtccactgcaagggaccttgcaccatccgcaacgtctggttcgaggacgta
tgcgaggacgcaatcaccatcaggcagagctccggtacgaccaccatcaccggcggaggc
gccaagaacgccgacgacaaggtcattcagcacaacgggggaggtcttgtcaagatcgac
tcgtactgcgtccaggacttcggcaagctctatcgatcgtgcggcaactgcagcacgcag
gtgaagcgcgaggtgcagatcagcaacatcatcgctcgcaacggcaaggtgctcgcaggc
gtgaactcgaactacggggatgtagcgacgatcgacacgaagacgaactcgtacacaagc
gtcaagtcgatctgcaacacgtaccagggcaacgacaagagccaggagcctcctatgctg
acggagaacaagtcgaatgccaataaccactttgctaagccgtctgtgccacgtgacatt
acacacgtccctggagctgatgatcgaaattcgaacgcgccttcccgccaccattatacc
atgttatcactccatccaaacgaaaagctggagaaggcgaggagcccaatgggaagagcg
aaagaagaaccaaactcagcaaatacttcatacgccaaaaagatctattaccaagtactc
tggttcgttgcctcggatctggtttggacaactactgacggcgagatgcaggagagcccc
cagacaaaaaagcacaagacctgggatggcgacggtgtaatagtcattactggttcaacc
tatgagcttctggatgaggaggctaagaccctcggtagcgggaagattcttggggagctc
gtagagggggcggaaattaaacttggtggcagagaggtacaaatagagagggaggttcct
gccacagagttcttgtctggtaagatattcggcgggaatgcgtcatcgtatcaaccggcc
gcaaagtcggtcactctcaaccctcgtcaaagtggctttgtcgcaccaaagttcaacact
cctcgactgtccaatgcggctaaagctattccagatgcgaagggcaaaggcgtagatcgc
acaaatacccaagcgaagccggctgcagccccacctcaatctgtggtatcggccgcaggt
ctgtattggactgctaattggcgccgcccacaggcccgcaagcacaaagtatgggaggga
tcaggggctatttcgctggccgacggccagctgaagctggtgaacgaggaaggacatact
gttggagtcaaggcttggaagggggacccaccagattttggggacgtgattatcgttgga
gggcatgaagcggaaatcgacgcgcctctgtccagcgttgaatacgcagcatcatttagg
ccccctacagttcgcgtggtctcggtcgaagggacaggcgaggatgccattgacggtgca
ccggcggcggaaatcgaccttacatatgagtgtccccggtcaagagcaaatctcctgcca
agaatggcacaactcgccctttactgggcacctctttccaaattctctatcaatgcgaca
cgtaaaccaaccaatcgtgcgttcaggccacccacgatgaagaccgtcgaaactggagcg
caaacgacagaccaagaaacacaaatcatgggaaggctcggaatcgtcgaacttaccaac
aatacgatgaagctttacaatgacaagggccgcctgctcaagacgatgaggtggaagtcc
gaggtgccactcactggtgtcaccttttcgatagacaatctcgaagtggaacttcagact
ccagtgcctatggaagacctcgaatcaaagacctgcttcgagcctgggtactcgcccccc
ggaacatcgaccagcctggcacctatcgccgccaattccacttatgttgctcctcgttcg
ttctatgctgctccagagaagaaagagaagccccctggccctttgtacgacccggatgca
gatggagctcttgtcatgccaactccgaatgaggcacaccagaagaaatataacaccaaa
aacctcccggtagtgccagtagtagtcgatccgatgctaactaaatttttgcgtcctcat
caacgagaaggccagaacccgtactacagcccatcaggcgctgtgccaggggtaattgga
aaggcattaattgtgtgcccagtgtcgttagtcaataactggagaaaagagttcataaaa
tggcttggtcgagaccgccttagggtattcgtgggagacaaggacaagaacaatatcaaa
caatttatgaactcgagaatacaccacgtgctgattattggctatgagaagcttcgaacg
gtcatcgacgatttaacttactgcaccccgcctattggacttattgtttgcgacgaaggt
caccgtctcaagtctgctcaagctaaaactaccaaaatgttcgaagccctaaaacgaaca
cctcgacgaataattttgtcaggtacacctattcagaatgatttgggcgagtttcatgct
atggcagatttttgtaattccgggatgcttgaggagtacccgcgctttcgtagaatttac
gaaacgcctattttgaagagtcggtctcccgaagcgagtgcaaaagatatcgagctcggg
gcggcacgagctgcgcagctcaatgagctcgccaaatcatttgtgttgagaaggaccgca
gatatccttaccaactacctccctcctaaaaccgaatacgtcttgttcgtacagcctacg
gcactacagctgtcggtctttcaaaagatccttcgcccgaccatgttcaagatttgtccg
attatgcttgccaaaccggacaaaggcgctggtgccgaaaatgggaagacgacccggaca
cttgttcaggaagctttggggcttttaccgcctggggcagctccggatgacattactttg
agtggtaaactaattgcacttgccactcttcttaaacagttgcgacaaacaacagaagag
aaatgtatactcgtatctcactacacgtcgacactgaacattgtggaggcatactgccgt
agcgtgtattatacctatagtcgtttggatggctccactgcagtgaccaaacgccagcaa
cttgttgacgaatttaaccaagccaagcagtcgaaaatttttatttctcctgagcgcgaa
agcgggcggcgttgggctgaatttaattggtgcttcccggttaatcctaatcgacagcga
ctggaatccttcccacgacctacagtcgatggctcggattcatcgtga

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