Rhizoctonia solani: RhiXN_10806
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Entry
RhiXN_10806 CDS
T09256
Name
(RefSeq) U3 small nucleolar RNA-associated protein
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
rsx
Rhizoctonia solani
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsx03009
]
RhiXN_10806
04121 Ubiquitin system [BR:
rsx04121
]
RhiXN_10806
Ribosome biogenesis [BR:
rsx03009
]
Eukaryotic type
90S particles
Other 90S particles
RhiXN_10806
Ubiquitin system [BR:
rsx04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
RhiXN_10806
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
Sof1
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EML
WDR55
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_NUP159_NUP214
MIOS_WD40
PAN2_N
Motif
Other DBs
NCBI-GeneID:
67033084
NCBI-ProteinID:
XP_043185966
UniProt:
A0A8H8P562
LinkDB
All DBs
Position
14:join(538680..538947,539005..539183,539240..539280,539334..539408,539462..539627,539684..539949,540007..540201,540258..540420)
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AA seq
450 aa
AA seq
DB search
MKISVLQHDLKSHLPQRKGDATPITRNLDPLAHPFSRARERTRALNAAKIERMFSKPFVA
SLEGHIDGVYTLATKAGDLETITSGSGDGEIIVHDLVTHRHLLKVPGAHKGTVSAITYAN
GPRLLSCGVDRTVKLWDASLTSDEEETIAHAPLNVFPGKVAFNAIDHHKTDQLFATASNI
VQLWDETKSSPVSDLTFPTSNETVTALRFNLSESSILATTGTDRTLTLYDIRTGKAERRL
VMQMRANALAWSPTFPTTLLLASEDHNLYTFDVRSLTNPTQIYKGHVAAVMSCGWSPTGQ
EFVSGGWDRTVRIWKEGEGSKPVVYTGKRMQRVFATAYTQDARFILSGSDDGNVRLWKAR
ASEKLGVVEGRERASKEYRDRLRERWSMDKEVGRIERQQNLPVAVKKAGQLKRTMLDARA
VKEERRRKHTRAGASKPKAERKKVVVAEQT
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaagatctcagtattgcaacatgacctcaagtctcatctacctcagcgcaagggagac
gctacacctattacacgaaatctagatcctttagcccacccattttcacgagcacgcgag
cgaaccagagcactaaatgcagcaaagatcgagcggatgttctcgaagccctttgttgct
agcctcgagggacatattgatggtgtatatacactagcaaccaaagctggagacttggag
acaatcaccagcgggagtggggatggagagatcattgtgcatgacttggtgactcatcgg
cacctgctcaaggtccctggagcgcacaagggaacagtatcagcaatcacctacgccaac
ggaccaaggttacttagctgtggggtcgatcgaactgtcaagctctgggatgcttcgctt
acatccgatgaagaggaaacaattgctcatgctcctttgaacgtattccctggaaaagta
gcctttaatgcgatcgaccatcacaaaacggaccagctctttgcaacggcatcaaatatc
gtccaattatgggatgagaccaaatcctccccagtctccgatcttaccttcccgacctca
aatgaaaccgttacggctctccgctttaacctctctgagtcctccatcctcgctacgact
ggtacagacagaaccttgaccttgtacgacattcgaactggcaaggcagagagacgactg
gtcatgcagatgcgcgccaacgccttggcctggtctcccacatttccaacaactctcctc
cttgcatccgaagaccacaacctctacacctttgacgtacgatcgctcaccaacccaact
caaatatacaagggtcacgttgcagccgttatgtcttgtggatggtcacctacaggacaa
gaattcgttagtggaggatgggatcgtacagttagaatatggaaagaaggcgaaggaagt
aaacctgtggtgtatactgggaaacgcatgcaaagggtatttgcaacggcctatacccag
gacgcgcgatttatactatcgggatcggatgatgggaatgtgcgattatggaaagcacgt
gcatcggagaaactgggtgttgtggaaggccgagagcgcgcatcgaaagagtacagggat
cgattgcgagagaggtggagcatggataaggaggttgggcggatcgaaaggcaacaaaat
ctccccgttgcagtcaagaaggctggacagctcaaaaggactatgctcgatgcccgtgcg
gtcaaagaagagcggaggagaaagcatacacgagctggggcgagcaaaccgaaggctgaa
cgaaaaaaggttgtggtggcagaacaaacgtga
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