Rhizoctonia solani: RhiXN_10891
Help
Entry
RhiXN_10891 CDS
T09256
Name
(RefSeq) RNA recognition motif protein
KO
K14407
cleavage stimulation factor subunit 2
Organism
rsx
Rhizoctonia solani
Pathway
rsx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
RhiXN_10891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsx03019
]
RhiXN_10891
Messenger RNA biogenesis [BR:
rsx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
RhiXN_10891
U7-dependent histone pre-mRNA processing factors
RhiXN_10891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
CSTF_C
RRM_7
RRM_10
Motif
Other DBs
NCBI-GeneID:
67033169
NCBI-ProteinID:
XP_043186051
UniProt:
A0A8H8T1H1
LinkDB
All DBs
Position
14:complement(join(824759..824761,824842..824925,824977..825204,825260..825379,825432..825652,825703..825753,825814..825872,825928..825977,826034..826062,826113..826131))
Genome browser
AA seq
287 aa
AA seq
DB search
MSRVVFVGNVPYDMTEEQLTQVFSTVGPVAGFRLVFDRETGKAKGYGFCEFFDHESAASA
VRNLHNTEVGKFTSRGEILGERDGHHGKPYRSGGGGPPDIQTILSSIPNGVPVPPGASSL
DIITNAIVALGPDKQLELLQQMKQFITTNPDAARAVLVAHPQLAYACFQTMLTAEVVDPA
VLQKMLAGGAAQPAPSNRRHRLPCLYLHPQTNINKDITGTSPQAVPPMPPNPAYQSYQPP
APAPPQASPAFQAVSPQQQAMIQQVLSLTPEQINGLPPNERAAIMQL
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgggtagtatttgtcggaaatgttccatacgatatgacagaggaacaacttacc
caggtgttcagcaccgtgggtcccgtcgcaggatttcggctagtctttgatcgagaaaca
ggaaaagccaagggatatggattttgcgaattttttgaccatgaatccgcagcttccgca
gtccgtaacctccacaatacagaagtcggaaaattcacctctcgaggcgaaattctggga
gaacgggatggtcaccacggaaaaccataccgatcaggaggaggaggaccacccgatatt
caaacaatactttcttctattccgaatggggtacctgtaccaccgggggctagttcctta
gatatcattacgaacgctattgtcgcgctgggtcccgacaaacaattagagttgctccaa
caaatgaagcaattcatcaccaccaatccagacgcggctcgggccgttctagttgcacat
ccacagctcgcgtacgcctgtttccaaaccatgctgacagccgaagtcgtagatcctgcg
gtactccagaaaatgctcgctggcggtgctgcacaacctgcccccagcaacaggcgccac
cgcctcccatgcctgtatctgcacccccaaaccaatatcaacaaggatattacgggcacc
tccccgcaagcagtaccacccatgccacccaatccagcgtaccaatcgtaccaaccccca
gcccctgcacctccgcaggcatcgcccgctttccaggctgtatcacctcagcaacaggct
atgatccaacaagttctgtcacttactccggaacagatcaacggtttgccgccaaacgag
cgggccgctatcatgcaattataa
DBGET
integrated database retrieval system
