Rhizoctonia solani: RhiXN_10997
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Entry
RhiXN_10997 CDS
T09256
Name
(RefSeq) structure-specific endonuclease subunit SLX1
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
rsx
Rhizoctonia solani
Pathway
rsx03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
RhiXN_10997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsx03400
]
RhiXN_10997
DNA repair and recombination proteins [BR:
rsx03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
RhiXN_10997
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GIY-YIG
SLX1_C
SPATS2-like
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
67033275
NCBI-ProteinID:
XP_043186157
UniProt:
A0A8H8P7D6
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All DBs
Position
14:join(1180547..1180734,1181238..1181349,1181409..1181612,1181665..1181795,1181844..1182076,1182123..1182226,1182278..1183117)
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AA seq
603 aa
AA seq
DB search
MSLESFRMHSTGKATKPFSAGWDQRRELKVVQHRNASEYALDHDVKLERTNVNPPLNGLN
GFAAAPPQGPGYTPLIIASGKAPSKMASRTTLGEDQHTIPLFYACYLLRSVKSKSSRSTY
VGSTPDPPRRIRQHNGELTQGAYKTRRGRPWVMTMIVYGFPSKLAALQFEWAWQHPYRSR
HLRVPETTRGENNYSQIFKQDSQANFLRTKIFVAHTMLSVAPYSTWPLHVKIFTDEAKNI
WDEICRVDTNGPLPEGSTVSVELEGVDGRAYVPVSRRTQMRTGPIDVKDTKFNSSHIHKY
QSLVNQQTQLSCCICSSEIDVKRVDHLRIALCPGGDCTAISHLDCLARSFIKHPSNPPGL
IPRGGICKACEQYTLWGDVVRGCYRRARGGLQQPDLGQDPEDNDQEASAQAVDDLSRHIN
ALQISGSPRKARTVKSTAPKSCAKSTSRATRRNVQKARVIDSDVEDFGAEMDAVDCDTED
SEPAHPSRRQNASVASYQRASKPTKAKNILGSCDKTRSIDEVVRRALDKMPISGLGESMQ
ARSTLSMTPSRQKSTKSRNGIGPGAQGQIAITVDEENGNFGTPRDASRPKRTPSPEYIDL
EGI
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttgaatcatttcggatgcactcaactggcaaagcaaccaagccattctcggcg
gggtgggatcagcgccgcgagctgaaggtggtacaacaccgcaatgcaagcgaatacgcc
ctcgaccacgatgtaaaattagaacgcacaaacgttaatccccctttgaatggtttgaat
ggttttgcagcagcgccgccccaaggcccaggatatacgccacttataatcgcctctgga
aaggcaccttcgaagatggcctctcggaccacgttgggtgaggaccaacacaccattccg
ctgttttacgcttgttatttacttcggtctgtcaaatccaaatcttcgcgttctacctat
gttgggagcaccccagaccccccgcgtcgaattcggcagcataacggggagctaacacag
ggcgcctacaaaactcgacgaggtcgcccatgggtcatgactatgatagtgtatggtttc
ccttccaaacttgctgctctccagtttgaatgggcatggcagcatccataccggtccagg
catctccgtgtccctgaaacaactcgaggtgagaacaattactctcagatcttcaaacag
gacagccaagcgaattttctgagaaccaaaatatttgttgcacacacaatgctgagcgtt
gctccttacagtacatggccactgcatgtcaagatctttactgacgaggccaaaaatata
tgggacgagatttgcagggtagacacgaacgggccgctccccgaaggatcgacggtttcg
gtcgaactcgaaggtgtagacgggagagcgtatgttcccgtctctcgacgtacccagatg
cgtacaggtccaatcgacgttaaagataccaagttcaattcatcgcacatccataagtac
cagtcacttgtgaaccaacagactcagctgtcgtgttgtatatgtagctcagaaatcgac
gtcaagcgcgtggatcatctacgtatagcactttgccccggaggagactgtaccgcaatt
tcacatttagactgcctggctcggtcgttcatcaaacacccatccaaccctccggggttg
attcctcgaggcggtatctgcaaagcctgcgagcaatatacactatggggtgatgtcgtt
cggggatgttaccgtcgggctcgtggtggtctgcaacaacctgacttgggacaagaccca
gaagacaacgatcaagaagcaagtgctcaggcagttgatgacctctctcgccatataaat
gctctgcaaattagtggatctcctcgaaaggcacgcactgtcaaatcaacagccccgaaa
agttgcgccaagtctacttctcgagcgactaggcgtaatgtccagaaggctagggtgatt
gattccgacgtcgaggattttggggccgaaatggatgcagtggattgcgacacagaggat
tcggaacccgctcacccatcacgaaggcaaaatgcatcggttgcgagctatcagcgtgcc
tctaaacccacaaaggccaaaaatattctagggtcttgcgacaagacacggagtattgat
gaagtcgttcgtcgggctttggataaaatgccgatttccggtcttggtgaatcgatgcaa
gcgcgctcaaccctaagtatgactccaagtcgccagaaatccaccaaatcgaggaacggg
atcgggcccggtgctcaaggacaaatagcgataactgtcgacgaggagaacggtaacttt
ggaacaccgcgcgacgcctctagaccaaagaggacgccatctccagagtatatcgatctc
gaaggtatctag
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