Rhizoctonia solani: RhiXN_11005
Help
Entry
RhiXN_11005 CDS
T09256
Name
(RefSeq) F-box and WD-40 domain protein
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
rsx
Rhizoctonia solani
Pathway
rsx04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
RhiXN_11005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsx04121
]
RhiXN_11005
03036 Chromosome and associated proteins [BR:
rsx03036
]
RhiXN_11005
Ubiquitin system [BR:
rsx04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
RhiXN_11005
Chromosome and associated proteins [BR:
rsx03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
RhiXN_11005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Beta-prop_TEP1_C
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
EIF3I
F-box-like
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML_2
Beta-prop_SCAP
WDR55
F-box
NBCH_WD40
WDR54
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_Nup120_160
Motif
Other DBs
NCBI-GeneID:
67033283
NCBI-ProteinID:
XP_043186165
LinkDB
All DBs
Position
14:complement(join(1211713..1211782,1211834..1211922,1211974..1212165,1212317..1212354,1212411..1212502,1212553..1212695,1212773..1213278,1213328..1213814))
Genome browser
AA seq
538 aa
AA seq
DB search
MQGEATVSPPRHLSRRSLPSSSSVPRSGSRLRTLLGLNQPQPEPRSDLHDTLYIVPRQAA
DAHDMRVFENVARMYEGGSRSYDTCENGRVLTPTPDPGCSGGMGMGRGLLPRLLEMITTP
KRKGKSKIVYDIDGELLPLDGEEGELIDDEACFMEPNDSDGIDLLVMLPPELALYILSQL
DLDSVVACLAVSHAWRRLASDDTVWRTLFYRQSGWFVNIPRRQAQILASQTLPAQSSQSR
SPSLLSSLAPSSRRTSAEPTRPPANLSQGEFSLNWPDLFRQRHKVARKWYFGAAKSNKLA
GHLDSVYCLELDTAADTIVTGSRDRSIKIWSGFMCSGSSDRTIRVWERAAGSWGVKAVLS
GHAGGVLDLRIDDKWIVSCSKDTFIRVWDRQTLQQHCVLKGHEGLSTLSAFKVTKSLVQA
EMDDTIISGSNDRKIKVWSASTGDCLFTLPGHELLVRALAYDSVSRRLVSASYDRTIKVW
EFGEGRQDGWKLVREFKNLHDSHIFDVKFDATKIVSTSHDQKILVLDFAYDVDALLFT
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgcagggcgaggcaaccgttagtcctccgcgacacctctcacggcgctccctaccgtcc
agctccagtgtccctcgaagcggtagccgactccggacattactcgggctgaaccaacct
cagcctgagcctcggtcagacttgcatgatacgctgtatatagtccctcgtcaggcggcc
gacgcacacgatatgagggtctttgagaatgtagcgagaatgtatgaaggtggaagtcgg
tcttacgatacgtgtgagaacggacgagttcttacccccacgccggatcctggatgttcg
ggtgggatggggatgggccgaggattattaccacgactcttggaaatgatcaccacccct
aagcgaaagggaaagtctaaaattgtgtacgatatagatggagagctacttcctctggac
ggcgaggagggtgaattgattgatgacgaggcttgtttcatggagcccaacgactccgac
gggatagacctgttggtcatgttaccgcctgagctggcgctgtacatcttgtcacaattg
gatctggattcggtcgtcgcatgtttagcggtatcacatgcttggcgtcggcttgcctcc
gacgacacagtctggcgaacactcttttatcgacagtcgggctggttcgtcaacattccg
cgacgacaggcccagatactcgcttcccagaccttgcctgcccaatcgtcgcaatcacgt
tccccatcactcctttcttcgcttgcaccctcatctcgacggacctctgctgaaccgaca
cgacctcccgcaaatttgagccaaggagagttctcactcaactggccagacctcttcagg
caacgacataaggtcgccaggaaatggtattttggggctgccaagtcgaacaagctggcg
ggccacctcgatagtgtgtactgcctggaacttgacaccgcggcagataccatcgtcact
ggttcccgagaccgttccatcaaaatttggagtggcttcatgtgttccgggagtagcgat
aggacaatcagggtgtgggaacgggccgctgggtcttggggagttaaagcggtcttgagt
ggacatgcgggtggagttctggatttgaggatagacgacaagtggattgtcagctgttca
aaggacaccttcatccgggtctgggatcgccaaacgcttcaacagcactgtgtcttgaag
ggacatgagggcctgtcaacgctgtcggccttcaaggtaaccaagtcgttagtgcaagcg
gagatggacgatacaattatttccggctccaatgaccgtaaaatcaaagtttggtctgcc
tcgactggggattgtctgtttacgttaccggggcacgagctgttggttcgcgcgctggcg
tatgattccgtgtcgcgacggcttgtcagcgcaagttacgatcgtacgatcaaggtttgg
gagtttggtgaaggaaggcaggatgggtggaaactagtccgagagttcaagaatttgcat
gatagtcatattttcgacgtcaagttcgatgccacgaaaattgttagcacctcccatgat
caaaaaatactggtcctcgactttgcgtacgacgtagatgcactcctcttcacctaa
DBGET
integrated database retrieval system
