KEGG   Rhizoctonia solani: RhiXN_11228
Entry
RhiXN_11228       CDS       T09256                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC5
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
rsx  Rhizoctonia solani
Pathway
rsx03020  RNA polymerase
rsx03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rsx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    RhiXN_11228
  09124 Replication and repair
   03420 Nucleotide excision repair
    RhiXN_11228
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rsx03021]
    RhiXN_11228
   03400 DNA repair and recombination proteins [BR:rsx03400]
    RhiXN_11228
Transcription machinery [BR:rsx03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     RhiXN_11228
DNA repair and recombination proteins [BR:rsx03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      RhiXN_11228
SSDB
Motif
Pfam: Zn_ribbon_RPB9 Zn_ribbon_TFIIS Rpr2 Zn_ribbon_16 DZR RecR_ZnF
Other DBs
NCBI-GeneID: 67033506
NCBI-ProteinID: XP_043186388
UniProt: A0A8H8P989
LinkDB
Position
14:complement(join(1950533..1950650,1950715..1950755,1950807..1950852,1950907..1950929,1951069..1951090,1951138..1951196))
AA seq 102 aa
MPPKAIPTPEPPKLQFCSECNNLLYPKNDLLTVTKEQPGVTEDLQTDPTLAHAVMDCPNC
QHNDAVYFQDQSKRIETPMTLSTYVPTVAIPLLIQAGSGAGW
NT seq 309 nt   +upstreamnt  +downstreamnt
atgcctcccaaagcgattccgactcccgagccacccaaactgcaattctgttccgaatgt
aacaatctcttataccccaaaaatgatttgctgactgttaccaaagagcagccgggtgtg
acggaagaccttcagactgaccccaccctcgcacatgcagtgatggactgtccaaattgc
caacacaacgacgcggtatactttcaggaccagtcaaaacgcatcgaaacacccatgacg
ctttctacgtatgtaccaactgtagccatacctttattgatccaagctggaagcggcgcg
gggtggtga

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