Rhizoctonia solani: RhiXN_11331
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Entry
RhiXN_11331 CDS
T09256
Name
(RefSeq) Exosome component EXOSC1/CSL4
KO
K07573
exosome complex component CSL4
Organism
rsx
Rhizoctonia solani
Pathway
rsx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RhiXN_11331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsx03019
]
RhiXN_11331
Messenger RNA biogenesis [BR:
rsx03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
RhiXN_11331
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
RhiXN_11331
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
Motif
Other DBs
NCBI-GeneID:
67033609
NCBI-ProteinID:
XP_043184656
UniProt:
A0A8H8T082
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All DBs
Position
12:complement(join(303871..303968,304026..304107,304162..304527))
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AA seq
181 aa
AA seq
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MNDFLLPGQPLQLQSPVTSSGIYGRNGVTRSSLLGIKSEGGIIPVTAGRAQPPSPGVTVI
GTITRLSPLQATMSITVVDGIPLPHGEEFTGVIRSQDVRSTEKDKVKIADCFRGGDVVRG
SVISLGDSRSYYVSTTRNDLGVIFATSEAGATMDPISWLEMRCPKTGLIEKRKCAKPTNI
P
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaacgactttctccttcctgggcagccgcttcaattgcaatcaccggtaacctccagc
gggatatatggtcggaacggagtgacaaggtcctcactactcggaatcaagtccgagggt
gggattatacctgtaactgctggacgggctcagcctccctctcctggtgtaacggtgatt
gggactattacccgactgtcaccactccaggctaccatgtctatcactgttgtcgacggc
attcctcttcctcacggagaagagttcacaggcgttattcgttcacaggatgtacgttca
actgagaaagataaagtaaagattgccgactgctttcgtggaggggacgttgtgcgaggc
tctgtaatctctctaggcgattccaggagctactatgtgtcgacgacccggaacgatctg
ggagtaatttttgctacgagcgaggctggtgcgactatggacccaatatcgtggttggaa
atgaggtgtcctaagactggcttaatcgaaaaacgcaaatgtgctaaacctacaaacatc
ccgtga
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