Ralstonia solanacearum UY031: RSUY_02090
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Entry
RSUY_02090 CDS
T06155
Symbol
sdiA_1
Name
(GenBank) Regulatory protein SdiA
KO
K19666
LuxR family transcriptional regulator, quorum-sensing system regulator SolR
Organism
rsy
Ralstonia solanacearum UY031
Pathway
rsy02020
Two-component system
rsy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rsy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RSUY_02090 (sdiA_1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RSUY_02090 (sdiA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsy03000
]
RSUY_02090 (sdiA_1)
Transcription factors [BR:
rsy03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
RSUY_02090 (sdiA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4
Sigma70_r4_2
HTH_20
HTH_23
Motif
Other DBs
NCBI-ProteinID:
ALF86608
UniProt:
A0A072T3U5
LinkDB
All DBs
Position
complement(235474..236184)
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AA seq
236 aa
AA seq
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MEPGFQDAYHAFRTAEDERQLFREIASIARQLGFDYCCYGARMPLPVSKPAVAIFDTYPA
GWMQHYQANGFLDIDPTVRAGASSGDMIVWPVSIRDEAARLWSDARDAGLNVGVARSSWT
AHGAFGLLTLARHADPLTAAELGRLSIATHWLANLAHTLMSPFLVPKLVPESNAVLTARE
REVLCWTGEGKTAYEIGQILHISERTVNFHVNNVLLKLAATNKVQAVVKAIATGLI
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaggtttccaggacgcgtatcacgcgttccgtacagcagaggacgagcgccag
ctctttcgggagatcgcgtcgattgcccggcagctcggctttgactactgctgctacggc
gcccgcatgcccttgccggtctccaagcctgccgtcgccatcttcgatacctatccggcg
ggctggatgcagcactaccaggccaacggcttcctggacatcgatccgaccgtgcgcgcc
ggcgcgagcagcggcgacatgatcgtctggcccgtgtccatccgcgacgaggccgcgcgg
ctgtggtcggatgcgcgcgatgccggcctgaacgtcggcgtcgcgcgctcgagctggacg
gcgcatggcgcgttcggcctgctgacgctggcccgccacgccgatccgctcacggcggcc
gagctcggccggctgtcgatcgccacccactggctggccaatctggcgcatacgctgatg
agcccgttcctggtgcccaagctggtgcccgaatccaacgcggtgctgaccgcgcgcgag
cgcgaagtgctgtgctggacgggcgaaggcaagaccgcctacgagatcggacagatcctc
cacatctccgagcgcacggtcaatttccacgtcaacaacgtattgctcaagctggcggcc
accaacaaggtgcaggcagtcgtcaaagcgatcgccaccggattgatctag
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