Ralstonia solanacearum UY031: RSUY_04380
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Entry
RSUY_04380 CDS
T06155
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
rsy
Ralstonia solanacearum UY031
Pathway
rsy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rsy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
RSUY_04380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsy03021
]
RSUY_04380
03400 DNA repair and recombination proteins [BR:
rsy03400
]
RSUY_04380
Enzymes [BR:
rsy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
RSUY_04380
Transcription machinery [BR:
rsy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
RSUY_04380
DNA repair and recombination proteins [BR:
rsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
RSUY_04380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
ALF86823
UniProt:
A0AAE3NJF0
LinkDB
All DBs
Position
500481..504710
Genome browser
AA seq
1409 aa
AA seq
DB search
MKALLDLFRQVQQEEQFDAIKIGLASPEKIRSWSYGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELAAPTAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAFVVVEPGMTPLKKSQIMSEDDYLAKCDEYGEGEFVAL
MGAEGIRELLRGIDIEKQIETIRAELQATGSEAKIKKFAKRLKVLEAFQRSGIKPDWMIM
EVLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRML
QEAVDSLLDNGRRGKAMTGANKRPLKSLAEMIKGKGGRFRQNLLGKRVDYSGRSVIVVGP
TLKLHQCGLPKLMALELFKPFIFHKLETMGIATTIKAAKKEVESQTPVVWDILEEVIREH
PVMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQME
ARTLMLASNNVLFPANGDPSIVPSQDVVLGLYYTTRDKINGRGEGMTFADISEVIRAYEN
KEVELASRVNVRITEYDLVNPEAAGDARFAPKITLQATTVGRAILSEILPKGLPFSVLNK
PLKKKEISRLINTAFRKCGLRETVIFADKLLQSGFRLATRAGISIAIDDMLVPPAKEKII
SEAAAKVKEYDKQYMSGLVTDQERYNNVVDIWGAAGDQVGKAMMEQLQTEDVVDRNGNTV
KQESFNSIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFI
STHGARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSNGVLMKALVEGGEVIEA
LRDRILGRVVIGDVVNPETQETAIESGTLLDEDLVELIDSIGVDEVKVRTPLTCDTRYGL
CAKCYGRDLGRGVLVNSGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKA
TGTVRFTATMRYVTNAKGEQIVISRSGEALITDDHGRERERHKIPYGATLLVRDGQAIKA
GTQLATWDPLTRPIISEYSGTIKFENVEEGVTVAKQMDEVTGLSTLVVIDAKRRTASTKG
IRPQVKLLDSSGAEVKIPGTDHSVTIGFQVGALITVKDGQQVHVGEVLARIPTESQKTRD
ITGGLPRVAELFEARSPKDAAVLAEVTGTTSFGKDTKGKQRLVITDLDGNAHEFLIAKEK
QVLVHDGQVVNKGEMIVEGPADPHDILRLKGVEELATYIVDEVQDVYRLQGVKINDKHIE
VIVRQMLRRVQIADVGDTKFIPGEQVERSELLDENDRVIAEGKRPATYENLLLGITKASL
STDSFISAASFQETTRVLTEAAIMGKVDDLRGLKENVIVGRLIPAGTGLAYHRARKAKET
ADRDRAAAIAEEEAASIFETPAVQQEGDA
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcattgctcgacctcttccgccaggtacagcaagaagagcagttcgacgcgatc
aagatcggtctcgcgtcgcccgagaaaatccgttcgtggtcgtacggcgaggtcaagaag
cccgagaccatcaactaccgcacgttcaagccggagcgtgacggcctgttttgcgccaag
atcttcggcccgatcaaggactacgagtgcctgtgcggcaagtacaagcgcctgaagcac
cgtggcgtgatctgcgagaagtgcggcgtggaagtgacgctggccaaggtgcgccgcgag
cgcatgggccacatcgagctcgctgcgccgaccgcgcacatctggttcctgaagtcgctg
ccgtcgcgtctgggcatggtgctcgacatgacgctgcgcgacatcgagcgcgtgctgtac
ttcgaagcattcgtggtggtcgaaccgggcatgacgccgctcaagaagagccagatcatg
tcggaagacgattacctggccaagtgcgacgaatacggcgagggtgaattcgtcgctctg
atgggcgccgaaggcattcgtgagctgctgcgcggcatcgacatcgagaagcagatcgag
acgatccgtgccgagctgcaggccaccggttcggaagccaagatcaagaagttcgccaag
cgcctgaaggtgctcgaggcgttccagcgctcgggcatcaagcccgactggatgatcatg
gaagtgctgccggtgctgccgccggagctgcgtccgctggtgccgctggatggcggtcgt
ttcgccacgtcggacctgaacgacttgtatcgccgcgtgatcaaccggaacaaccgcctg
aagcgtttgctcgagctgaaggcgccggagatcatcgtgcgcaacgaaaagcgcatgctg
caggaagcggtggactcgttgctggacaacggccgtcgcggcaaggcgatgaccggcgcc
aacaagcgtccgctgaagtccctggccgaaatgatcaagggcaagggcggccgtttccgt
cagaacctgctgggcaagcgcgtggactactcgggccgttcggtcatcgtggtgggcccg
acgctcaagctgcaccagtgcggcctgccgaagctgatggcgctcgagctgttcaagccg
ttcatcttccacaagctggagacgatgggcatcgccaccaccatcaaggcggcgaagaag
gaagtcgaaagccagacgccggtggtgtgggacatcctcgaagaggtgatccgcgagcac
ccggtgatgctgaaccgtgcgccgacgctgcaccgcctgggcatccaggcgttcgagccg
gtgctgatcgaaggcaaggccatccagctgcacccgctggtctgcgcggcgttcaacgcc
gacttcgacggtgaccagatggctgtccacgttccgctgtcgctcgaagcgcagatggaa
gcgcgcaccctgatgctggcgtcgaacaacgtgctgttcccggccaacggcgatccgtcg
atcgtgccgtcgcaggacgtggtgctgggtctgtactacacgacccgcgacaagatcaac
ggccgcggcgagggcatgaccttcgccgacatctcggaagtgatccgcgcctacgagaac
aaggaagtcgaactggcttcccgcgtgaacgtgcggatcaccgagtacgacctggtcaac
ccggaagccgccggcgacgcccgcttcgcgccgaagatcacgctgcaggccaccacggtc
ggccgcgcgatcctgtcggagatcctgccgaagggtctgccgttctcggtgctgaacaag
ccgctgaagaagaaggaaatctcgcgcctgatcaacacggcgttccgcaagtgcggtctg
cgcgagacggtgatcttcgccgacaagcttctgcagtcgggcttccgcctggccacgcgc
gccggtatctcgatcgccatcgacgacatgctggtgccgccggccaaggagaagatcatc
tccgaggccgccgccaaggtgaaggaatacgacaagcagtacatgtcgggtctggtgacc
gaccaggagcgttacaacaacgtcgtggacatctggggcgccgccggcgaccaggtgggc
aaggcgatgatggagcagctccagaccgaagacgtggtcgaccgcaacggcaacaccgtc
aagcaagagtcgttcaactccatctacatgatggccgactcgggcgcacggggttccgcg
gcgcagatccgtcagctggcagggatgcgtggcctgatggccaagccggacggctccatt
atcgaaacgccgattaccgcgaacttccgcgaaggcctgaacgttctgcagtacttcatc
tcgacccacggtgcgcgtaagggtctggccgatacggcactgaagaccgcgaactcgggt
tacctgacccgtcgtctggtcgacgtgacgcaggatctggtggtggtggaagacgattgc
ggtacctccaacggcgtgctgatgaaggcactggtcgagggcggtgaagtgatcgaagcc
ctgcgcgaccgtatcctgggccgcgtggtcattggcgacgtggtgaacccggaaacgcag
gaaaccgcgatcgaatccggcacgctgctggacgaagacctggtcgagctgatcgattcg
atcggtgtggacgaggtcaaggtccgcacgccgctgacctgcgacacgcgctacggcctg
tgcgccaagtgctacggccgcgacctcggccgcggcgtgctggtgaactcgggcgaagcg
gtgggcgtgattgccgcccagtcgatcggtgagccgggcacgcagctgaccatgcgtacg
ttccacatcggtggcgcggcatcgcgtgcggcagtcgcgtcgagcgtggaagccaaggcg
accggtaccgtgcgcttcacggcgaccatgcgctatgtcaccaacgcgaagggcgagcag
atcgtcatctcgcgttcgggcgaggcgctgatcaccgacgatcacggccgcgagcgtgag
cgccacaagatcccgtacggcgcgacgctgctggtgcgcgatggccaggccatcaaggcc
ggcacgcagctcgccacgtgggatccgctgacgcgtccgatcatttcggaatactcgggc
accatcaagttcgagaacgtcgaagaaggcgtgaccgtcgccaagcagatggacgaagtg
accggtctgtcgacgctggtggtgatcgatgccaagcgtcgcacggcgtcgacgaagggc
atccgtccgcaggtgaagctgctcgactcgtcgggcgccgaagtgaagatcccgggcacg
gaccactccgtgaccatcggcttccaggtgggcgcgctgatcaccgtgaaggatggtcag
caggtgcatgtgggtgaagtgctggcccgtatcccgaccgaatcgcagaagacgcgggac
attaccggtggtctgccgcgcgtggccgagctgttcgaagcgcgttcgccgaaggacgcc
gccgtgctggcggaagtcaccggcacgacctcgttcggcaaggacaccaagggcaagcag
cgcctggtgatcacggatctcgacggcaacgcccacgagttcctgatcgccaaggaaaag
caggtgctggtgcacgacggccaggtggtcaacaagggcgagatgatcgtcgaaggcccg
gccgatccgcacgacatcctgcgcctgaagggtgtggaagagctggcgacctacatcgtc
gacgaagtgcaggacgtgtaccgtctgcagggcgtgaagatcaacgacaagcacatcgaa
gtgattgttcgtcagatgctgcgtcgcgtgcagatcgccgatgtgggcgacaccaagttc
atcccgggtgaacaggtggagcgctcggagctgctcgacgagaacgaccgcgtgatcgcc
gaaggcaagcgtccggccacctacgagaacctgctgctgggtatcacgaaggcgtcgctg
tcgaccgacagcttcatctcggcggcgtcgttccaggaaaccacgcgcgtcctcaccgaa
gccgccatcatgggcaaggtggacgacctgcgcggtctgaaggaaaacgtcatcgtcggc
cgcctgatcccggccggtaccggtctggcttaccaccgcgcccgcaaggcgaaggaaacc
gccgaccgcgaccgcgccgcggcgattgcggaagaagaagccgcctcgatcttcgagacg
cccgccgtccagcaggaaggcgacgcgtaa
DBGET
integrated database retrieval system
