Ralstonia solanacearum UY031: RSUY_06970
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Entry
RSUY_06970 CDS
T06155
Symbol
rnb
Name
(GenBank) Exoribonuclease 2
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
rsy
Ralstonia solanacearum UY031
Brite
KEGG Orthology (KO) [BR:
rsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsy03016
]
RSUY_06970 (rnb)
Enzymes [BR:
rsy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
RSUY_06970 (rnb)
Transfer RNA biogenesis [BR:
rsy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
RSUY_06970 (rnb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
ALF87074
LinkDB
All DBs
Position
771578..773659
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AA seq
693 aa
AA seq
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MQLLFEEGGEIRAGTVLSQQGEAYQVELPSAKRTKVKSRDVLLQFAQPSAGELAQAAHAL
STDIDLDFLWECAPAEEFGFTDLAGEYFGTAANATQQAALAIALHGSPIYFRRKGRGRYQ
RAPEDQLKAALAGLERKKQQAAQQAAYEAELKAMRLPDVFRGKALQLLFKPDKNSIEYKA
FDAACTALGMPPMRLMVAVGGIANARALHEARFLSECFPKGTGFPDVTVPEPVLDLPAAD
VRAFSIDDVTTTEIDDAISVTPIDAATVRIGIHIAAPGFGIQRGEALDAVARQRLSTVYF
PGDKITMLPESVVDRYTLQEGRACPALSLYVTVDRATWTVTAGETRCETVTVAANLRHNL
LEEIITAEALADGTGDYPFKDEIAVLWPFACALYDARQQARVASGLKPEGAQKGDYSFYL
DPIAEAEGGGERVRIEQRKRGSPLDKIVAELMILANSTWGRMLADAGVPGIYRTQKAWGM
HRTRMQTYPAPHEGLGVAQYAWSTSPLRRYVDLVNQWQIAAVAQHGVTAKLIAPFKPKDA
DLLAAVADFEATYAAYAAHQSTMERYWCLRWLKQEARTRTQAVVLKEGMVRFAEIPLTTR
VPELAQTARGTHVVLDVLEIDEISLEVSCRVIEVLAPAADAEAEAAALEDELAQVEANAP
AEPQPAADGEEARAETGDAVAQQQQDDGTSAAS
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgctgtttgaagaaggcggcgagatccgcgcaggcaccgtcttgtcccagcag
ggcgaggcctaccaggtcgaattgccgagcgccaagcgcaccaaggtcaagtcgcgcgat
gtgttgctgcagttcgctcagccgtcggccggtgagctggcgcaggccgcgcacgcgctg
tcgacggacatcgatctggacttcctgtgggaatgcgcgcccgccgaggaattcggcttc
accgatctggccggcgagtatttcggcaccgccgccaatgccacgcagcaggccgcgctg
gcgatcgcgctgcatggctcgcccatctatttccgccgcaagggccggggccgctatcag
cgggcgcccgaagaccagctcaaggcggcgctcgccgggctggagcgcaagaagcagcag
gccgcgcagcaggctgcctatgaggccgaactgaaggccatgcgcctgcccgacgtcttc
cgtggcaaggcattgcagttgctgttcaagcccgacaagaacagcatcgaatacaaggcg
ttcgatgccgcgtgcacggcgctcggcatgccgccgatgcggctgatggtggcggtcggc
ggcatcgccaatgcgcgcgcgctgcatgaggcgcgtttcctgtcggagtgtttcccgaag
ggcaccggctttcccgatgtgacggtgccggagccggtgctcgacctgccggccgccgac
gtgcgtgccttctcgatcgacgatgtgaccaccacggaaatcgacgatgcgatttccgtc
acgcctatcgacgccgccacggtgcgcatcggtatccacatcgcagcgcccggcttcggt
atccagcgcggcgaggcgctggatgcggtcgcgcgccagcggctgtccaccgtgtacttc
cctggcgacaagatcaccatgctgccggagtcggtcgtggaccgctacacgctgcaggag
gggcgcgcgtgcccggcgctgtcgctgtatgtgacggtcgatcgcgctacctggacggtg
accgccggcgagacgcgctgcgagaccgtgacggtggcggccaacctgcgccacaacctg
ctggaagagatcatcaccgccgaggcgctggccgatggcaccggcgactatccgttcaag
gacgagatcgccgtcctgtggccctttgcgtgcgcgctgtacgacgcccgccagcaggcc
cgcgtcgccagcggcctgaagccggagggcgcgcagaagggcgactacagcttctacctg
gacccgattgccgaagccgagggcggcggcgaacgcgtccgcatcgagcagcgcaagcgc
ggctcaccgctggacaagatcgtcgccgagttgatgatcctcgccaacagcacctggggc
cgcatgctggccgatgccggcgtgccgggcatctaccgtacgcagaaggcgtggggcatg
caccgcacgcgtatgcagacctacccggcgccgcacgaggggctgggcgtggcgcagtac
gcgtggagcacctcgccgctgcgccgctatgtcgatctggtcaaccagtggcagatcgca
gccgtggcgcagcacggcgtgacggccaagctgatcgcgcccttcaagccgaaggatgcc
gacctgctggccgccgtggccgacttcgaagccacctatgccgcctatgcggcgcaccag
tcgaccatggagcgttactggtgcctgcgctggctcaagcaggaagcacgcacccgcacg
caggccgtggtgctgaaggaaggcatggtgcgcttcgccgaaattccgctgacgacgcgg
gtgccggaactggcgcagaccgcgcgcggcacgcatgtcgtgctcgacgtgctggagatc
gacgagatcagcctggaagtatcgtgccgcgtgattgaggtgcttgccccggcagcggat
gccgaagcggaagccgccgcgctggaagacgagctggcgcaagtcgaggcgaacgcaccc
gctgaaccccaaccggccgccgatggggaagaagcccgcgccgaaacaggcgatgctgtg
gcgcagcagcagcaggacgatggaacgtcagccgctagctaa
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