Ralstonia solanacearum UY031: RSUY_11080
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Entry
RSUY_11080 CDS
T06155
Symbol
ihfB
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
rsy
Ralstonia solanacearum UY031
Brite
KEGG Orthology (KO) [BR:
rsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsy03032
]
RSUY_11080 (ihfB)
03036 Chromosome and associated proteins [BR:
rsy03036
]
RSUY_11080 (ihfB)
03400 DNA repair and recombination proteins [BR:
rsy03400
]
RSUY_11080 (ihfB)
DNA replication proteins [BR:
rsy03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RSUY_11080 (ihfB)
Chromosome and associated proteins [BR:
rsy03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
RSUY_11080 (ihfB)
DNA repair and recombination proteins [BR:
rsy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
RSUY_11080 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
ALF87478
UniProt:
A0AAE3NIC2
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All DBs
Position
1194348..1194770
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AA seq
140 aa
AA seq
DB search
MPMTKSELVEKLAARFPQLLLRDADIAVKTILDAMSDALADGHRIEIRGFGSFGLNRRPP
RVGRNPKSGEKVLVPEKRVPHFKAGKELRERVDRSLERQGETSSEGEPVSLTAVKAARQA
GGHHAAGFPAEATPTLAMSR
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atgcccatgaccaagtccgaactcgtggagaaattggccgcccgctttccgcagctgctg
ctgcgggacgcggacatcgcggtcaagacgatcctggatgcgatgtccgacgccctggcg
gacggccatcgcatcgagattcgcgggtttggcagctttggcctgaatcggcgtccaccg
cgtgtcgggcgcaaccccaagtccggcgagaaagtgctggtgcccgaaaagcgggtgccg
cacttcaaggcgggcaaggagttgcgcgaacgggttgaccgcagcctcgagcggcagggc
gaaacctcttcggagggcgagcccgtgtcgctgacggctgtgaaggcggcgcggcaagcc
ggcggtcaccatgccgccggttttccggcggaggcgacgccaacgttggccatgtcgcgc
tga
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integrated database retrieval system
