Ralstonia solanacearum UY031: RSUY_12200
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Entry
RSUY_12200 CDS
T06155
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rsy
Ralstonia solanacearum UY031
Pathway
rsy03420
Nucleotide excision repair
rsy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RSUY_12200 (uvrD)
03430 Mismatch repair
RSUY_12200 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsy03400
]
RSUY_12200 (uvrD)
Enzymes [BR:
rsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RSUY_12200 (uvrD)
DNA repair and recombination proteins [BR:
rsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RSUY_12200 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
RSUY_12200 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
AAA_30
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ALF87589
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All DBs
Position
1313961..1316441
Genome browser
AA seq
826 aa
AA seq
DB search
MVGERLELYGLSVSGMGEAGEVAGIISGFRKGPSRMSDLLAHLNPEQRAAVTLPDESALI
LAGAGSGKTRVLTTRIAWLVQSSRVSPSGVLAVTFTNKAAKEMTARLSAMLPINTRAMWI
GTFHGLCNRLLRAHYRDAGLPQTFQILDTQDQLSAVKRLLKSLNIDDEKFPPKNVQYFIN
GAKEQGLRAGDLEVANEFDRRMADLYAAYDAQCQREGVVDFAELLLRCYELLRYNDAIRA
HYQRRFKHILVDEFQDTNRLQYAWLKILAGLGEPGVAPNAIFAVGDDDQSIYAFRGANVG
NMVDFEREFRVEHRIKLEQNYRSHGNILDTANHLIAHNTRRLGKNLRTDAGHGELVRVYQ
SATDGQEAGWIVDEIRERIVSGTARSEIAILYRSNAQSRVIEHSLFSVGIPYKVYGGLRF
FERAEIKHALAYLQLLENVDNDAAFGRVVNFPARGVGARSLELLQDAAKLYGASLAASVP
YLTGAAGTKLAAFVRLIEQMRADTRQMTLPEIVQHVIHASGLITHYQGEKEGLDRIENLQ
ELVTAAQAFVAEEGYGADAIATALPVRHDAMLRIEGGETDGDVVGELVAGEAPMEMTPLV
AFLTHASLEAGDNQAQAGQDAVQLMTVHAAKGLEFHVVFITGLEEGLFPHENSLQDTDGL
EEERRLMYVAITRARERLYLSFAQSRVLHGQIRYHIRSRFFDELPEATLKWLTPQHAGYS
PTRRAQGAQGDSAWGRDWFKRPERGDDEAYTGRPTGGMDTGKNYADAKRAAETGFRVGQS
VFHSKFGEGVITTLEGEGTDARAHIKFNRHGVKVLALGIAKLDPIN
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggtgggcgaaaggctggaattatacggcctgtcagtgtccggcatgggcgaagcgggg
gaggtggccggtataatttccggattccgcaaaggcccttcccgcatgtccgacctgctc
gcccatctgaaccccgaacaacgcgccgctgtcacgcttcccgacgaatcggcgctgatc
ctggccggggcgggcagcggcaagacgcgcgtgctgaccacccgcatcgcctggctggtc
cagagcagccgggtgtcgccgtcgggtgtgctggccgtcaccttcaccaacaaggcggcc
aaggagatgaccgcgcggctgtccgccatgctgccgatcaacacgcgcgccatgtggatc
ggtaccttccacggcctgtgcaaccggctgctgcgcgcgcattaccgcgacgccgggctg
ccgcagactttccagattctcgatacgcaggatcagctctcggcggtcaagcgcctgctc
aagtcgctgaacatcgacgacgagaagttcccgcccaagaacgtccagtacttcatcaac
ggcgccaaggagcagggcctgcgcgcgggcgacctggaagtcgccaatgaattcgaccgc
cgcatggccgacctgtacgcggcctacgatgcgcagtgccagcgcgagggcgtggtcgac
ttcgccgagctgctgctgcgctgctacgagctgctgcgctacaacgatgcgatccgcgcg
cattatcagcggcgcttcaagcacatcctggtcgacgaattccaggacaccaaccgcctg
caatacgcctggctgaagatcctggccggcctgggcgagccgggtgtcgcgcccaacgcc
atcttcgccgtgggcgacgacgaccagagcatctatgccttccgcggcgccaatgtcggc
aacatggtggacttcgagcgcgaattccgcgtcgaacaccgcatcaagctggagcagaac
taccgttcgcacggcaacatcctggatacggccaaccacctgatcgcccacaacacccgc
cgcctgggcaagaacctgcgcaccgacgccggccatggcgagctggtgcgcgtctaccag
tccgccaccgacggccaggaggccggctggatcgtggacgagatccgcgagcgcatcgtc
agcggcacggcgcgctccgagatcgccatcctgtaccgcagcaacgcgcagtcgcgggtg
atcgagcattcgctgttctcggtgggcatcccttacaaggtgtacggcgggctgcgcttc
ttcgagcgcgccgaaatcaagcacgcgctggcctacctgcaactgctggagaacgtggac
aacgatgccgccttcggccgcgtggtcaacttcccggcgcgcggcgtcggggcacggtcg
ctggagctgctgcaggatgcggccaaactgtatggcgcgtcgctggcggcatcggtgcct
tacctgaccggcgcggcggggaccaagctcgcggcgttcgtgcggctgatcgaacagatg
cgcgccgacacgcgccagatgacgctgcccgagatcgtccagcacgtgatccacgccagc
ggcctcatcacgcattaccagggcgagaaggaaggcctcgaccgcatcgagaacctgcag
gaactggtgaccgccgcgcaggccttcgtggccgaggaaggctacggcgccgatgccatc
gccaccgcgctgccggtgcgccacgatgcgatgctgcgcatcgagggcggcgagacggac
ggcgatgtcgttggcgaactggtcgctggcgaggcgccgatggagatgacgccgctggtc
gccttcctgacgcatgcctcgctggaggccggcgacaaccaggcccaggccggccaggac
gcggtgcaactgatgaccgtgcatgcggccaaggggctggagttccacgtcgtcttcatc
accggactggaggagggcctgttcccgcacgagaacagcctgcaggacaccgacggcctg
gaagaagagcgtcgcctgatgtacgtggcgattacccgggcgcgcgagcgtctgtatctg
tcattcgcgcagagccgcgtgctgcatgggcagatccgctaccacatccgttcgcgcttc
ttcgacgagctgccggaagcgaccctgaagtggctgacgccgcagcacgccggctacagt
cccacgcgccgcgcgcagggcgcgcaaggcgacagcgcctggggccgcgactggttcaag
cgccccgagcgcggcgacgacgaggcttacaccggccgcccgaccggcggcatggacacc
ggcaagaactacgccgatgccaagcgcgcggccgagaccggcttccgcgtcgggcagtcg
gtgttccacagcaagttcggggaaggcgtcatcacgacgctggaaggcgagggcaccgat
gcgcgcgcccacatcaagttcaaccgccacggcgtgaaggtgctggcgctgggcatcgcc
aagctggacccgatcaactga
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