Ralstonia solanacearum UY031: RSUY_12450
Help
Entry
RSUY_12450 CDS
T06155
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
rsy
Ralstonia solanacearum UY031
Pathway
rsy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RSUY_12450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsy03019
]
RSUY_12450
Enzymes [BR:
rsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RSUY_12450
Messenger RNA biogenesis [BR:
rsy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RSUY_12450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Fe-ADH
AAA_22
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
ALF87612
UniProt:
A0AAE3V255
LinkDB
All DBs
Position
1344789..1346276
Genome browser
AA seq
495 aa
AA seq
DB search
MNTETTSTAPSSDSVTFDTFGLHPDILRALTESGYTRPTPIQAAAIPVVVGGRDVMGAAQ
TGTGKTAGFSLPIIQNLLPEANTSASPARHPVRALILTPTRELADQVYDNVAKYAKYTAL
RSAVVFGGVDMNPQTEQLRRGVEILVATPGRLLDHVQQRSVNLSQVRMLVLDEADRMLDM
GFLPDLQRIINLLPAHRQTLLFSATFSPEIKKLAASYLRHPQTIEVARSNATADNVRQVI
YTVPDGHKQAALVHLLRQRAEQGLPSQCIVFSNSKIGCSRLARALEREKINANAIHGDKT
QIERMQTLEAFKQGTVDVLVATDVAARGLDISQMPCVINFDLPFNAEDYVHRIGRTGRAG
ASGDALSLFAPGDERLLADIEKLIKRNLPREALVDFDPTGEQARDRERRERDERRNRTEI
RRSRERDERNGARVLDHTVVRPPFRPSEDPFFSRPYESNVPAETAESAKPAQAAGHPRSA
KRPIAALLGGVPRKR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaacactgagacaacgtctacagcaccgtccagcgattcggtgacgttcgacactttc
ggcctgcacccggatatcctgcgggccctgaccgagagcggttatacccgacccacaccg
atccaggccgccgcgattcccgtggtggtcggcggccgcgacgtgatgggcgcggcgcag
accggcaccggcaagaccgccggcttctcgctgccgatcatccagaacctgctgccggaa
gccaacaccagcgcctcgccggcgcgccacccggtgcgggcgctgatcctcacgcccacg
cgcgagctggccgaccaggtctacgacaacgtcgccaagtacgcgaagtacacggcgctg
cgcagcgcggtcgtgttcggcggtgtcgacatgaacccgcagaccgagcaactgcgccgc
ggcgtggaaatcctcgttgccacgccgggccgcctgctcgatcacgtgcagcaacgcagc
gtgaacctgtcgcaggtgcgcatgctggtgctggacgaagccgaccgcatgctcgacatg
ggcttcctgcccgacctgcagcgcatcatcaacctgctgccggcgcatcgccagacgctg
ctgttctcggccacgttctcgcctgagatcaagaagctggcggcgagctacctgcgccat
ccgcagaccatcgaagtggcgcgcagcaacgccaccgccgacaacgtccgccaggtcatc
tacaccgtgcccgatggccacaagcaggccgccctggtgcacctgctgcgccagcgcgcc
gagcagggcttgccgagccagtgcatcgtgttctccaacagcaagatcggctgttcgcga
ctggccagggcgctcgagcgcgagaagatcaacgccaatgccatccatggcgacaagacc
cagatcgaacgcatgcagacgctcgaggcgttcaagcagggtacggtcgacgtgctggtc
gccaccgacgtggcggcgcgcggcctcgacatctcgcagatgccctgcgtgatcaacttc
gacctgccgttcaatgcggaagactatgtccaccgcatcggccgcaccggccgtgccggc
gcctcgggcgatgcgctgtcgctgttcgctccaggcgacgagcggctgctggccgacatc
gagaagctgatcaagcgcaacctgccgcgcgaggcacttgtcgatttcgatccgaccggc
gaacaggcccgcgatcgcgagcgccgcgagcgcgacgagcgccgcaaccgcaccgagatc
cgccggtcccgcgagcgcgatgagcgcaacggtgcccgggtgctcgaccacacggtggta
cgcccgccattccggccgtcggaagatccgttcttctcgcgtccgtacgagtcgaacgtg
cccgccgagacggcggaaagcgccaagccggcgcaggccgccggccacccgcgcagcgcc
aagcgtccgatcgccgctctgctgggcggcgtgccgcgcaagcgctga
DBGET
integrated database retrieval system
