Ralstonia solanacearum UY031: RSUY_16120
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Entry
RSUY_16120 CDS
T06155
Name
(GenBank) hypothetical protein
KO
K03628
transcription termination factor Rho
Organism
rsy
Ralstonia solanacearum UY031
Pathway
rsy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RSUY_16120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rsy03021
]
RSUY_16120
03019 Messenger RNA biogenesis [BR:
rsy03019
]
RSUY_16120
Transcription machinery [BR:
rsy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
RSUY_16120
Messenger RNA biogenesis [BR:
rsy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RSUY_16120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
NACHT
S1CSD-TOTE-2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ALF87957
UniProt:
A0A073A012
LinkDB
All DBs
Position
complement(1717156..1718418)
Genome browser
AA seq
420 aa
AA seq
DB search
MHLTELKSLHVSQLLEMAGQLEIDNAQRMRKQELMFAILKKKAKQGETIFGDGTLEVLPD
GFGFLRSPETSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVN
TQPPEAVKNRIMFENLTPLHPNRTLTLERDIKAEENITGRIIDMIAPIGRGQRALLVASP
KSGKTVMLQHIAHAITANHPEAELFVLLIDERPEEVTEMQRTVRGEVVASTFDEPAVRHV
QVAEMVIEKAKRLVELKKDVVIVLDSITRLARAYNTVVPTSGKVLTGGVDANALQRPKRF
FGAARNLEEGGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPAINL
NKSGTRREELLIKPDILQKVWILRKFIHDMDEVEAMEFLLDKLKSTKNNAEFFDMMRRGS
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgacagaactgaaatccctgcatgtgtcccaattgctggaaatggcgggacag
ctggagatcgacaacgcgcagcgcatgcgcaaacaggaactgatgtttgccatcctgaaa
aagaaggcgaaacagggggaaacgattttcggcgacggcacgctggaagtgctgcccgac
ggcttcggctttttgcgttcgccggaaacctcgtacctggcgagcacggacgacatctac
atcagcccgtcgcagatccgccgcttcaacctgcataccggcgacaccatcgaaggcgaa
gtccgcacgcccaaggacggcgagcgctacttcgcgctggtgaaggtcgacaaggtcaac
acccagcctcctgaagcggtcaagaaccgcatcatgttcgagaacctgacgccgctgcat
ccgaaccgcacgctcacgctcgaacgcgacatcaaggccgaagagaacatcaccggccgc
atcatcgacatgatcgccccgatcggccgcggccagcgcgcgctgctcgtggcctcgccc
aagtcgggcaagaccgtgatgctgcagcacatcgcgcatgccatcacggccaaccatccg
gaagccgagctgttcgtgctgctgatcgacgagcgtccggaagaagtgaccgagatgcag
cgcaccgtgcgcggcgaagtggtggcctccaccttcgacgaaccggccgtgcgccacgtg
caggtcgcggagatggtgatcgagaaggccaagcgcctggtcgagctgaagaaggacgtg
gtgatcgtgctggactcgatcacgcgtctggcccgcgcctacaacaccgtggtgccgacc
tccggcaaggtgctgaccggcggtgtggatgccaacgccctgcagcgcccgaagcgcttc
ttcggtgccgcgcgcaacctggaggaaggcggctcgctgaccatcatcggcacggcgctg
atcgaaaccggcagccgcatggacgacgtgatctacgaagagttcaagggcaccggcaac
atggaagtgcacctggagcgccgcctggccgagaagcgcgtctaccccgccatcaatctg
aacaagtcgggcacgcgccgcgaagagctgctgatcaagccggacatcctgcagaaggtg
tggatcctgcgcaagttcatccacgacatggacgaggtcgaggcgatggaattcctgctc
gacaagctcaagtccacgaagaacaacgccgagttcttcgacatgatgcgacgtggcagc
tga
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