KEGG   Ralstonia solanacearum UY031: RSUY_16120
Entry
RSUY_16120        CDS       T06155                                 
Name
(GenBank) hypothetical protein
  KO
K03628  transcription termination factor Rho
Organism
rsy  Ralstonia solanacearum UY031
Pathway
rsy03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rsy00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    RSUY_16120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rsy03021]
    RSUY_16120
   03019 Messenger RNA biogenesis [BR:rsy03019]
    RSUY_16120
Transcription machinery [BR:rsy03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     RSUY_16120
Messenger RNA biogenesis [BR:rsy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     RSUY_16120
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N OB_RNB AAA_25 NACHT S1CSD-TOTE-2 AAA_19
Other DBs
NCBI-ProteinID: ALF87957
UniProt: A0A073A012
LinkDB
Position
complement(1717156..1718418)
AA seq 420 aa
MHLTELKSLHVSQLLEMAGQLEIDNAQRMRKQELMFAILKKKAKQGETIFGDGTLEVLPD
GFGFLRSPETSYLASTDDIYISPSQIRRFNLHTGDTIEGEVRTPKDGERYFALVKVDKVN
TQPPEAVKNRIMFENLTPLHPNRTLTLERDIKAEENITGRIIDMIAPIGRGQRALLVASP
KSGKTVMLQHIAHAITANHPEAELFVLLIDERPEEVTEMQRTVRGEVVASTFDEPAVRHV
QVAEMVIEKAKRLVELKKDVVIVLDSITRLARAYNTVVPTSGKVLTGGVDANALQRPKRF
FGAARNLEEGGSLTIIGTALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPAINL
NKSGTRREELLIKPDILQKVWILRKFIHDMDEVEAMEFLLDKLKSTKNNAEFFDMMRRGS
NT seq 1263 nt   +upstreamnt  +downstreamnt
atgcatctgacagaactgaaatccctgcatgtgtcccaattgctggaaatggcgggacag
ctggagatcgacaacgcgcagcgcatgcgcaaacaggaactgatgtttgccatcctgaaa
aagaaggcgaaacagggggaaacgattttcggcgacggcacgctggaagtgctgcccgac
ggcttcggctttttgcgttcgccggaaacctcgtacctggcgagcacggacgacatctac
atcagcccgtcgcagatccgccgcttcaacctgcataccggcgacaccatcgaaggcgaa
gtccgcacgcccaaggacggcgagcgctacttcgcgctggtgaaggtcgacaaggtcaac
acccagcctcctgaagcggtcaagaaccgcatcatgttcgagaacctgacgccgctgcat
ccgaaccgcacgctcacgctcgaacgcgacatcaaggccgaagagaacatcaccggccgc
atcatcgacatgatcgccccgatcggccgcggccagcgcgcgctgctcgtggcctcgccc
aagtcgggcaagaccgtgatgctgcagcacatcgcgcatgccatcacggccaaccatccg
gaagccgagctgttcgtgctgctgatcgacgagcgtccggaagaagtgaccgagatgcag
cgcaccgtgcgcggcgaagtggtggcctccaccttcgacgaaccggccgtgcgccacgtg
caggtcgcggagatggtgatcgagaaggccaagcgcctggtcgagctgaagaaggacgtg
gtgatcgtgctggactcgatcacgcgtctggcccgcgcctacaacaccgtggtgccgacc
tccggcaaggtgctgaccggcggtgtggatgccaacgccctgcagcgcccgaagcgcttc
ttcggtgccgcgcgcaacctggaggaaggcggctcgctgaccatcatcggcacggcgctg
atcgaaaccggcagccgcatggacgacgtgatctacgaagagttcaagggcaccggcaac
atggaagtgcacctggagcgccgcctggccgagaagcgcgtctaccccgccatcaatctg
aacaagtcgggcacgcgccgcgaagagctgctgatcaagccggacatcctgcagaaggtg
tggatcctgcgcaagttcatccacgacatggacgaggtcgaggcgatggaattcctgctc
gacaagctcaagtccacgaagaacaacgccgagttcttcgacatgatgcgacgtggcagc
tga

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