Ralstonia solanacearum UY031: RSUY_16180
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Entry
RSUY_16180 CDS
T06155
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rsy
Ralstonia solanacearum UY031
Pathway
rsy03030
DNA replication
rsy03430
Mismatch repair
rsy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RSUY_16180 (dnaX)
03430 Mismatch repair
RSUY_16180 (dnaX)
03440 Homologous recombination
RSUY_16180 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rsy03032
]
RSUY_16180 (dnaX)
03400 DNA repair and recombination proteins [BR:
rsy03400
]
RSUY_16180 (dnaX)
Enzymes [BR:
rsy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RSUY_16180 (dnaX)
DNA replication proteins [BR:
rsy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RSUY_16180 (dnaX)
DNA repair and recombination proteins [BR:
rsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RSUY_16180 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
DNA_pol3_tau_5
RuvB_N
AAA_16
AAA_22
DUF3646
AAA_18
AAA_14
AAA_30
Herpes_Helicase
nSTAND3
AAA_2
AAA_19
TsaE
PIF1
Mg_chelatase
AAA_assoc_2
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ALF87961
LinkDB
All DBs
Position
1725850..1728054
Genome browser
AA seq
734 aa
AA seq
DB search
MSYQVLARKWRPRDFTTLVGQEHVVKALTHALEQQRLHHAYLFTGTRGVGKTTLSRILAK
SLNCIGTDGQGGITAQPCGVCRACTEIDAGRFVDYIEMDAASNRGVDEMAQLLDRAVYAP
TAGRFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL
KQMPPGHIVSHLDRILGEEGIAHESNALRLLAAAAQGSMRDALSLTDQAIAYSAGEVTET
AVRGMLGAIDQSYLVRLLDALADENGAALIEIADEMAGRSLSFSGALQDLASLLQKIALA
QVVPAAVQDDWPEADDIRRLAERFDAQSVQLFYQFANLGRNELALAPDEYAGFTMTLLRM
LAFQPGQSGGDAAPPSGAGKRAVPSAGAPGGSPRPAVAAAAAAATGPVAQAVPAASAERV
VEEPRATYQADRPAAAAPAAAPASATPAPAGAPARRSPALEALAAARQASSRGARGGAAA
PASTPAAVPAPAPAPAARPAMAGPRPNPAAAPASPRREPATASAPADDFAPPPWEELPGE
FASPSLDQIDAAFAGWETAPTTRPGAQASAGARPAQTEPPVAAPVPAKAAAPEPVAAATP
PDLSASGLTAFDGDWPTLAAGLPLRGLAQQLAHQSELTAVEGATVRLRVPLPALTEAGVV
ERLEAALTERFGMPVRVACDIGAARATAAAVDAEQRAQRQRDAEDAIAADPFVQALVRDF
AATVVPGSIQPHAH
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaagtgctcgcccgcaagtggcgcccccgcgatttcaccacgctggtcggt
caggaacacgtggtgaaggcgctcacgcatgcgctcgaacagcagcgcctgcatcacgct
tacctgttcaccggtacgcgcggtgtcggcaagaccacgctgtcgcgcattctcgccaaa
tcgctcaattgcatcggcacggacgggcagggcggcatcaccgcgcagccgtgcggtgtg
tgccgcgcgtgcaccgagatcgatgccgggcgcttcgtcgactacatcgagatggacgcc
gcttccaaccgcggcgtcgacgagatggcgcaattgctcgaccgcgcggtctacgcgccc
acggccggccgcttcaaggtctacatgatcgacgaagtgcacatgctgaccaaccacgcc
ttcaacgcaatgctgaagacgctggaggagccgcccgagcacgtcaagttcatcctcgcg
accaccgatccgcagaagattcccgtcacggtgttgtcgcgctgcctgcagttcaacctg
aagcagatgccgccgggacacatcgtgtcccacctggaccgcatcctcggcgaggagggc
atcgcgcacgagtccaatgcgctgcgcctgctggccgcggccgcgcagggctcgatgcgc
gatgcgctgtcgctgaccgaccaggccatcgcgtacagcgccggcgaggtgaccgagacg
gccgtgcgcggcatgctgggcgcgatcgaccagagctacctggtgcgcctgctcgatgcg
ctcgccgacgagaacggtgcggcactgatcgagatcgccgatgagatggccgggcgcagc
ctgagcttctcgggagcgctgcaggacctcgcctcgctgctgcagaaaatcgcgctggcg
caggtcgtccccgctgctgtgcaggacgattggcccgaggctgacgatatccggcgcctg
gctgagcgcttcgatgcgcagtcggtgcagctgttctaccagttcgccaacctcggccgc
aacgagctggcgctggcgcccgacgaatacgccggcttcacgatgacgctgctgcgcatg
ctggcgttccagcccggccagtcaggcggcgatgccgcgccgccgtcgggtgctggcaag
cgtgccgtgccgtcggccggcgcgccgggcggatcgccgcggccggcggttgcggccgcc
gcggccgctgccacagggccggtcgcccaggcggtgcccgctgccagtgcggaacgggtg
gtcgaagaaccgcgcgcgacgtatcaagccgatcggccggctgccgccgcaccggctgcg
gcgcctgcctcggcaactccggcaccggccggtgcgccggcccgccgctcaccggcactg
gaagcgctggccgcagcacgccaggcgtcgagccggggtgcgcgcggtggtgccgcggca
ccggcttccacacctgccgctgtgccggctccggcaccagcaccggccgcgcgtccggca
atggccggcccgcgcccgaatccggccgccgcgcccgcgtcgccgcgtcgtgaaccggcc
accgcatccgcccctgccgacgactttgccccgccgccctgggaggagctgcccggcgag
tttgcctcgccgtctctcgatcagatcgatgcggcgttcgccggctgggaaacggcgccg
acgacgcgcccgggtgcgcaggcatccgccggcgcgcgtcccgcacagactgagccgcct
gtcgcggcgcctgtgccggccaaggcggccgcaccggagcccgtggccgccgccacgccc
ccggacctgagcgccagcggcctgacagctttcgatggcgactggcccacgcttgcggcg
ggcctgccgctgcgcggtctggcgcagcaactggcgcaccagagcgagctgaccgccgtg
gagggcgccacggtgcgcctgcgcgtaccgctgcccgcgctgaccgaggccggcgtggtc
gagcggctggaggcggcgctgacggagcgtttcggcatgccggtccgcgtggcttgcgac
atcggcgcggcgcgggccacggcggctgccgtcgacgccgagcagcgcgcccagcgccag
cgcgacgctgaagacgccattgctgccgacccgttcgtgcaggcgctggtccgcgacttt
gccgcgacggtcgtgcccggttcgatccagccgcacgcgcactga
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