Ralstonia solanacearum UY031: RSUY_27180
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Entry
RSUY_27180 CDS
T06155
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
rsy
Ralstonia solanacearum UY031
Pathway
rsy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rsy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RSUY_27180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rsy03019
]
RSUY_27180
Enzymes [BR:
rsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RSUY_27180
Messenger RNA biogenesis [BR:
rsy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RSUY_27180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
P-loop_SecA
Sacchrp_dh_NADP
UTP25_NTPase-like
Motif
Other DBs
NCBI-ProteinID:
ALF89038
UniProt:
A0AAE3NIC1
LinkDB
All DBs
Position
complement(2895331..2896968)
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AA seq
545 aa
AA seq
DB search
MSFSELGLSDKLVRAVAELGYAEPTPIQRQAIPAILKGGDLLAGAQTGTGKTAGFTLPLL
HRLSAAQPNKVHTPHGMRYPIRALVLTPTRELAAQVEESVRAYGKYLPLKSMVMFGGVGI
NPQIDALKRGVDIVVATPGRLLDHVGQRTIDLSHIELLVLDEADRMLDMGFIHDIRKILN
ILPPKRQNLLFSATFSDDIRALADRLLDQPALIEVARRNTTAETVEQRIYPVDRERKREL
LAKLVRDNDWHQVLVFTRTKHGANRLAEQLTRDGISALAIHGNKSQSARTRALSEFKAGT
LRVLVATDIAARGIDIDQLPHVVNFDLPNVPEDYVHRIGRTGRAGAQGEAISLVCVDEHG
LLRDIERLIKRELPRTVLEGFEPDPTIAPEPIPNGRNNARGPRQGGGRGQQQPRQANGNA
APREPRAPREPREPRRESSGNGQGQSQGQGQGRNGGGRQRQAQGQRDGQAAPKPRNGHGN
GNGNGNGQSHARGQRQGNGQGSGQGGQRRASNTQAAQPAQVAQPAKQPFNGLFAKAAALL
GGRKG
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttttccgaactcggcttgtcagacaagctggtacgtgccgttgccgaactcggc
tacgcagaacccaccccgattcaacgccaggccatccccgccatcctcaagggcggtgac
ctgctcgccggtgcacagaccggcaccggcaagaccgccggcttcacgctgccgctgctg
caccgcctgtccgccgcgcagcccaacaaggtgcacacgccgcatggcatgcgctatccg
atccgcgccctggtgcttacgcccacgcgcgaactcgccgctcaggtggaagagagcgtg
cgcgcctacggcaagtacctgccgctgaagtcgatggtgatgttcggcggtgtcggcatc
aacccgcagatcgatgcgctcaagcgcggcgtcgatatcgtcgtggccacgccgggccgc
ctgctggaccacgtcggccagcgcaccatcgacctgtcgcatatcgaactgctggtgctg
gacgaagccgaccgcatgctggacatgggcttcatccacgacatccgcaagatcctcaac
atcctgccgcccaagcgccagaacctgctgttctcggcaacgttctcggacgacatccgc
gcgctggcagaccgcctgctggatcagcccgcgctgatcgaagtcgcgcgccgcaatacc
accgccgagacggttgagcagcgcatctacccggtcgaccgcgaacgcaagcgcgaactg
ctcgccaagctcgtgcgcgacaacgactggcaccaggtactggttttcacgcgcaccaag
cacggcgccaaccgcctggccgagcaactgacgcgcgacggcatttcggcgctcgccatc
cacggcaacaagagccagtcggcgcgcacgcgggcgctgtcggagttcaaggccggcacg
ctgcgcgtgctggtcgccaccgacatcgcggcgcgcggcatcgacatcgaccagctgccg
catgtggtcaacttcgacctgcccaacgtgccggaagactatgtgcaccgcatcggccgc
accggccgcgcgggtgcgcagggcgaggcgatctcgctggtgtgcgtggacgagcatggc
ctgctgcgtgacatcgagcgcctgatcaagcgcgaactgcccaggaccgtactggaaggc
ttcgagccggatccgaccatcgcgcccgagccgattccgaacggccgcaacaacgcccgt
ggcccgcgccaaggtggcggccgtggccagcagcaaccgcgtcaggccaacggcaatgcc
gcaccgcgcgagccgcgtgcgccgcgtgaaccccgcgaaccgcgccgcgagtcgagcggc
aacggtcagggccagagccaaggtcagggccagggtcgcaacggcggtggccgccagcgc
caggcgcagggccagcgtgacggccaggctgcaccgaagccgcgcaacggtcatggcaac
ggcaacggtaatggcaacggccagtcgcacgcacgcggccagcgccagggcaacggtcaa
ggcagcgggcagggtggtcagcgtcgtgcctcgaacacgcaagccgcgcagcccgcgcaa
gtggcacagccggccaagcagccgttcaacggtctgttcgccaaggcggcggcgctgctc
ggcggccgcaagggctga
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