Ralstonia solanacearum UY031: RSUY_44010
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Entry
RSUY_44010 CDS
T06155
Symbol
cdiA2_3
Name
(GenBank) tRNA nuclease CdiA-2
KO
K15125
filamentous hemagglutinin
Organism
rsy
Ralstonia solanacearum UY031
Brite
KEGG Orthology (KO) [BR:
rsy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rsy00536
]
RSUY_44010 (cdiA2_3)
Glycosaminoglycan binding proteins [BR:
rsy00536
]
Heparan sulfate / Heparin
Microbial pathogens
RSUY_44010 (cdiA2_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fil_haemagg_2
TPS
ESPR
Fil_haemagg
Clp_N
G1_gp67_C
Motif
Other DBs
NCBI-ProteinID:
ALF90704
LinkDB
All DBs
Position
unnamed:complement(1559617..1568904)
Genome browser
AA seq
3095 aa
AA seq
DB search
MNAKCYRTVFNAVRGMLVAVEESARGAGKGRQTGGQAGTSAASTPSAARFAVLPVVFGAW
CALGLSYTVHAQVVAAPGSGAQVIQTQNGLQQVNVARPNGSGVSLNTYTQFNVPGQGTIL
NNAPGITQTQQAGYVNGNPNLLPGGSARIIVNQVTSTQPSTLRGYLEVAGPRAEVVIANP
NGILVNGGGFINTSRATLTTGIPVFGGSGSLDAYRVTGGQITVQGAGLNASNVDQVDLIA
RAVSVNASVYANQLNVVAGANQVDHGTLNATPIAGDGAAPANGIDVSQLGGMYANKILLA
STEKGVGVSLRGVAAAQAGDLTLTAQGKLVLAGQTNASGNLSVSAQGGIDNTGTTYGRQS
AALGTSGDLTNSGTLAAQQDLRVNANNVASSGTLGAGVNSDGSLAHAGDLSVVAGGTLSA
TGQNVAGGNATLQGASINLAGSQTSANGNLNLNAQAGKLDLTGATTSTGGALSANAQGAL
INDRGHLSSQGAATVSAGSLSNQGGQMVSQNALSANVAGALSNQGGTLQAAGALNASAGS
LDNTAGHLASLNADGLNLTTAGRLTNAQGGTIGGNGNVAVQAGQLNNTGTISAVQNLGVS
TAQTLANAGTLAANGNTTVSAGTTLTNAGGTIAAGQRANVTAATLDNSAGTLTGNQLALA
AAALVNRGGTITQTGTGPIAIGVSGTLDNTGGAIRTNSADLTLAPATLINDHGTITDSGT
GTLSVTTGSLSNNGGTIATNGALDVQAGAVSNQGGKLSAQSQATLNVASLDNSAGGFVGA
QSVGITDQGGLDNAGGTVAASGALTVSAGSIANAGGAIKNAGTQATSVSASQSLDNTQGG
LIGGNGEVSVSVSSSGGSVDNSGGTVVAGGNAVVQSGGTLRNAAGRVQAKGSAAVTAAGA
ITNTGGQIEADGAAATLQVKGASLDNTNGRIANAGSGATTVGAASITNANTGGVAGAGTI
GGNGDVTVSGQTLSNTQGGQIVAGHDLTLATTRSVNNSGGTLSATNNFTVNAAGAAVVNQ
GGSIRGNGAVSVNVASLDNTAGKIGNDAGSGGSVAMMTGSLANQGGAIGSDRNLSVTTGQ
LSGDGRIIAGGDGAITINGNYTHSAANQIQANHNLTFTTTGALTNQGTLAAVNALTVNAA
SVDNRAGADLNSASTSVNAGGAITNAGRIEGDTVATQSASFANTGTVIGNNVTLNARGIS
NTGASAALAAATQLNLYASDGLSNTGGATIFSLGDINIAANAVRDGNGLLANRSNLVTND
QSTIEAQGNLEIATQTLNNVRPAPTVQTVTTGTTSTHETKRGKYIACATMNAAPHGGCTQ
AVWNSGYKTPIDATFSASQIVSQSSGPNPVDNVLVVNVNGQNQAIYYNTLTRNGDGTVSV
NYWDAYDPHTNYVPSTEYATRSDGHNGYQRVEIARDTTTVTQQDQVSGGSAPQARLLSGR
NMTLANVGTINNNYSAIAAGGSIRIGSSQQGGAVGSGNYGGTTVNNVGRTLYQYQTQNIV
STYAWNEGTNQDVGAVAQAPAVLPPVAIGGTGGTLIANNAVQINATNLNNTNVAAASSST
GATGGTLGANQSAAGVAASGQQTVGAASAQQPAVNAPQSVAGSNGALNISLPTSGLFSLR
TAPGQPYLIATDPRLTSYTKFISSDYMLSALNLNPQLVQKRLGDGFYEEKLVRDQITQLT
GRVYLQGYGNNEDQYRALMGSGVNAAKQFGLVPGIALTAAQMDALTSDIVWLVNQTVTLP
DGSTQQVLAPVVYLAHTHANDLQPTGALIAADDVQIHAVGSATNSGVIKGGTQTVITATD
IINRGGTIASDKTRGTTVVSASHDILNASGEISGNRVAAQAGHDIVNTTLVDTVGATAVA
GNSKASVSLVGRQGSIASTRDLLVRAGNDLTVHGANITAGGNAQVTAGHDIVVDAVQSVG
SQSVTQNGQHHWEADSTTHQGSTISAGGSLAMQSGNDTTFKGAKVSAGQDLVVVAGGDLT
ATTVTDTSKYNNVAADSRTRQEIDRTYDETAVGTAFSSGRHATLAAVSADAGGNARTDGK
GNVTLTGSSITAGTNTATPGAITIAGNGNVTLNEGREEHDSYQAVSSKRGSFVSGSTTGT
MQSTQANIGVASTVSGDSVVVQAGKDLTVQGSNVVGTNDVTLGAARNVRITTSQDTVQTA
SSYEKTDSGLLTNGGLSLSIGTRSQSNQQQSTQVTNTGSMVGSLNGNLTITAGSDAHITG
STIHAGNDLNVAGKTVTIDSAFDTASQSEQQRFRQAGVTVAITNPVVSAIQTGQQMASAA
KHVDGDPRLLALAAATTGLAAKNLYDSVGGDPVKAATSVGISISVGASKNDSQSQMQSST
AVGSTVSAGRNVTIAAAGAGKDSDINVIGSTVSSGKSTLLTAEGDVNLPAAQSASSQRST
NSGASAALGVSISGGSQTGIALTASVSGSRGHADGDSTAWTNTHVSAGNTLTIQSGGDTN
LKGAVASGQQVVANVGGNLNVESLQNTDHYDSKQQSAGVSVSVCVPPLCIGKSSVAGSFS
QNKLNNDYAGVAEQSGIKAGDGGFQVGVKGNTDLKGGVIASSDKAVQEGLNSLTTATLTH
SDIQNHANYSGSQVGISGGYSFGGGSTDKSGIGKDQQGKADNVNPVPGTEQASHGGFVAT
PPVVLSASGSASSTTRSAISGGAITITDSAKQQQLTGQTAAETVAGINRNTSNTGGALAP
IFDKDKIQAGFEIASQFVNQVGTFVENRLKEVDAAKEAAKNPNLTPEQRAQAQQRADQLT
ADWGPGGTYRQALTALTVAAGGNVTGGMGQFAQNATVAYLQELGANQVKQIADSLGSEDA
RAALHAIVGCAGAAASSQSCGAGAMGAAASSVLGSLLGRTDAMTPDQKQARVNLVRSVVA
GLAASTGVNAATATSAGQIEVENNQVWAPRPSPPPPSPGQPQKPFEIPGFKGETAKKGDG
VISDPMQQVDPTANVHANPVSEQTGPKILVSPIDIIKTAIEYVIASANNRMPIPEKVTAD
NGLQVESNPKHTPGMLGSNPRAGTEPRNSLDLFNSSIPGEDNARYAIDSKGNINRYYDDG
NGVYHWSGSTGDSGNPLNVSKIPVDVKRALGFKGK
NT seq
9288 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaagtgctaccgaaccgttttcaacgctgtgcgcggcatgctggtcgccgtg
gaggaatcggccaggggcgcgggcaaggggcgtcagacaggcgggcaggcgggcacgtcg
gcggcatcgacacccagcgcggcgcgcttcgctgtgctgccggtggtgttcggagcgtgg
tgcgccttgggcctgtcctacaccgtgcacgcccaggtggtcgcggcgccgggttcgggc
gcccaggtcatccagacgcaaaacggattgcagcaggtcaacgtcgcacgtccgaacgga
agcggtgtttcgctgaacacctacacgcagttcaacgttcccggccagggcaccatcctc
aataacgcccccggcatcacgcaaacgcagcaggccggctacgtcaacggcaacccgaac
ctgctgcccggcggctcggcgcgcatcatcgtcaaccaggtcaccagcacgcagccgtcg
acgctgcgggggtacctggaagtggccgggccccgcgcggaagtggtgatcgccaacccg
aacggcatcctggtcaacggcgggggtttcatcaatacgagccgggcgacgctgacgacg
ggtattccggtgttcggcggcagcggcagcctggacgcctaccgcgtgaccggcggccag
attacggtgcagggcgcaggcctgaacgctagcaacgtcgatcaggtggacttgattgcg
cgggcggtgtcggtcaacgcttccgtgtatgccaaccagctcaacgtggtggcgggggcg
aaccaggtcgaccacggcacgctcaacgcgacgccgattgccggtgacggcgccgcgccc
gccaacggcatcgacgtgagccaactgggcggcatgtatgccaacaagatcctgctggcc
tcgaccgagaagggggtcggagtgtcgctgcgcggtgtggcggcggcccaggccggtgat
ctgacgctgaccgcccagggcaaactggtgctcgccggccagaccaatgcgagcggtaac
ctgtccgtatcggcgcaaggcggcatcgacaacaccggcaccacctatggccggcaatcc
gccgccctcggcacgtccggcgacctgacgaacagcggcacgctggccgcgcagcaagac
ctgcgtgtcaacgcgaacaacgtcgcttccagcgggacgctgggggccggcgtcaacagc
gacggctcgctcgcgcatgcgggtgacctctccgtggtggccggcggcacgctgtccgcg
accggccagaacgtggccggtggcaacgcgaccctgcagggcgcgagcatcaatctggcc
ggcagccagacctcggccaacggcaacctgaatctgaacgcccaggccggcaagctggac
ctgaccggtgcgacaacaagcacgggcggcgcgttgagcgccaatgcccaaggcgcgctg
atcaacgaccgcggccacctctccagccaaggcgccgcgacggtgagcgccggcagtctg
tccaaccagggcggccagatggtctcgcagaatgcgctgtcggccaacgtcgcgggcgcg
ctctccaaccagggcggcaccttgcaagccgccggcgcgctcaatgcgagcgccggcagc
ctggacaacaccgccggccatctcgcgtcgctcaatgccgatggcctgaatctgacgacg
gccgggcggctcaccaacgcccagggcggcacgatcggcggtaacggcaatgtggccgtg
caggccggccagttgaacaacaccggcaccatcagcgccgtgcagaacctgggcgtcagc
accgcccagaccctggccaatgccggcacgctcgccgccaacggcaataccacggtctcc
gccgggacgacgctgaccaacgccggcggcacgatcgcagccggccagcgggccaacgtt
accgccgccacgctcgacaacagcgcaggcaccctcaccggcaaccagctcgcgctcgcc
gcagccgctctcgtcaaccgtggcggcaccatcacgcagaccggaacggggccgatcgca
atcggcgtgtccggcacgctcgacaacaccggcggcgccatccggacgaacagcgcggac
ctgaccctggcgcccgcaacgctgatcaacgaccacggcaccatcaccgattccggcacc
ggcacgctgtccgtgacgaccggcagcctgtccaacaacggcggcacgatcgcgacgaac
ggggcgctggacgtccaggccggtgccgtatcgaaccagggcggcaagctctcggcgcag
tcgcaggccacgctcaacgtcgcgtcgctcgacaacagcgcgggcggtttcgtgggcgcg
cagagcgtcggcatcaccgatcagggtggactggacaacgcgggcggcaccgtcgcggcg
agcggcgcgctgaccgtatcggcgggttccatcgccaatgccggcggggcgatcaagaat
gccggcacgcaggccaccagcgtgagtgcatcccaatcgctcgacaacacgcagggcggc
ctgatcggcggcaacggcgaggtgtcggtctcagtgtcgtcgtcgggcggcagcgtggac
aactccggcgggaccgtggtcgcgggcggtaatgcggtcgttcaatcgggcgggaccctg
cgcaatgcggccgggcgggtccaggccaagggcagtgccgccgtcacggcggcgggcgcc
atcacgaacaccggcggccagatcgaagcggatggcgcggcggcaacgctccaggtcaag
ggcgcgagcctcgacaacacgaacggccggatcgccaacgcaggcagcggcgcgaccacg
gtcggcgcggcctcgatcaccaacgccaacaccggcggcgttgccggggcgggcaccatc
ggcggcaacggcgatgtgaccgtctccggtcaaacgctgtcgaacacccagggcgggcag
atcgtcgccggccatgatctgacgctggccaccacccgatcggtgaacaacagcggcggc
acgctgtcggccaccaacaatttcacggtcaacgcagcgggcgctgccgtcgtcaaccag
ggcggttcgatccgcggcaacggcgcggtgagcgtcaatgtcgcctcgctcgacaacacc
gcgggcaagatcggcaacgacgccggcagcggcggcagtgtcgcgatgatgaccggttcg
ctggcgaaccagggcggcgccatcggcagcgaccggaacctgagcgtcacgaccgggcaa
ctgagcggcgacggccggatcatcgccggtggcgacggcgccatcacgatcaacggcaac
tacacccactcggccgccaaccagatccaggccaaccacaatctgacctttaccactacc
ggcgccctgaccaaccagggcacgctggccgccgtcaatgcgctgacggtcaatgcggcg
agcgtcgacaaccgcgccggggccgacctcaactcggcgtccacctcggtcaacgccggc
ggcgcgatcaccaatgccggccggatcgaaggcgatacggttgccacgcaaagcgcgtcg
ttcgccaatacgggcaccgtgatcggcaacaacgtgacgctgaacgcccggggcatcagc
aacacgggggcctcggcggcgcttgccgcagcgacgcaactgaacctgtatgcgtccgat
ggcctgtccaacacgggcggcgccacgatcttcagcctgggcgacatcaacattgccgcc
aacgccgtgcgcgatggaaacggcctgctggccaaccgctcgaacctggtcaccaacgat
cagtcgaccatcgaggcgcagggcaacctggagatcgccacccagacgctgaacaacgtg
cggccggcgccgaccgtgcagaccgtgacgacgggcaccacgtcgacacacgaaaccaag
cgcggcaagtacatcgcctgcgcgaccatgaacgccgcgccgcacggcggttgcacgcag
gcggtctggaacagcggctacaagacgccgatcgatgcgaccttctccgcgtcgcagatc
gtgtcgcagagttcggggccgaacccggtcgacaacgtgctggtggtcaacgtcaacggc
cagaaccaggcgatctactacaacacgctcacccgcaacggcgatggcacggtgagcgtc
aactactgggacgcctacgacccgcataccaactacgtgccctccacggagtatgcgacg
cgcagcgacggccacaatggctaccagcgtgtcgaaatcgcccgcgacacgaccaccgtg
acccagcaggaccaggtgagcggcggcagcgcgccgcaggcccggctgctgtccggccgc
aacatgacgctggccaacgtcgggaccatcaacaacaactacagcgccatcgcggccggc
ggctcgatccggatcggcagctcccagcagggcggcgcggtcggcagcggcaactacggc
ggcaccacggtcaacaacgtcggccggacgctctatcagtaccagacgcagaacatcgtc
tcgacctatgcgtggaacgaggggacgaaccaggatgtcggcgcggtggcgcaagcgcca
gcggtgttgccgccggtggcgatcggtggcacgggcggcaccctcatcgccaacaacgcg
gtccagatcaacgcgacgaacctgaacaacaccaacgtggccgccgccagctcgtcgacg
ggggcgaccggcggcacgctgggtgccaaccagtccgctgccggcgtcgccgcctccggc
cagcagacggtgggcgcggccagtgcccagcagcccgcggtgaatgcgccccagtcggtg
gccggcagcaatggtgcgctcaacatcagcctgccgaccagcggcctgttctcgctccgt
accgcgccgggccagccctacctgatcgccaccgatccgcgcctgaccagctatacgaag
ttcatctccagcgactacatgctgagcgcgctgaacctgaatccgcagttggttcagaag
cgcctgggcgatggcttctacgaagagaagctggtgcgcgaccagatcacccagctcacc
gggcgcgtctatctgcagggctacggcaacaacgaggaccagtaccgcgcgctgatgggc
tcgggcgtcaacgcggccaagcagttcggcctggtgccgggcatcgcgctgactgcggcc
cagatggacgcgctgaccagcgacatcgtctggctggtcaaccagaccgtgacgctgccg
gacggctccacgcagcaggtgctggcaccggttgtctacctggcccacacgcatgcgaac
gacctgcagcccaccggcgcgctgatcgccgcggatgacgtgcagatccatgccgtcggc
agcgcgaccaactcgggcgtgatcaagggcggcacgcagaccgtcatcaccgccaccgac
atcatcaaccgcggtggcaccatcgcaagcgacaagacgcgcggcacgaccgtggtttcc
gcgtcgcacgacatcctcaacgcgtcgggcgaaatcagcggcaaccgggtcgcggcgcag
gccgggcacgacatcgtcaacacgaccctggtcgataccgtcggcgcgacggcggtggcc
ggcaacagcaaggccagcgtaagcctggtcggccggcagggttcgatcgcctcgacgcgc
gatctgctggtgcgggcgggcaacgatctgaccgtgcatggcgccaacatcactgccggc
ggcaacgcccaggtgacggcgggtcatgacatcgtggtcgatgccgtgcagtcggtcggc
tcgcaatcggtcacccagaacggccagcatcattgggaagccgacagcacgacgcaccag
ggcagcacgatctcggcgggcggcagcctggccatgcagagcggtaacgacactaccttc
aagggggcgaaggtcagtgccgggcaggatctggtcgtcgtcgccgggggggacctgacg
gcgacgacggtcaccgacacatcgaagtacaacaacgtcgcggctgacagcagaacccgg
caggagattgaccgcacctatgacgaaacggccgttggcacggccttctcgtccggtcgc
catgcgacgcttgccgcagtcagtgcggatgctggcggcaatgcacggaccgacggcaag
gggaacgtgacgctgaccggttcctcgatcacggccggcacgaataccgccacgccgggg
gccatcacgatcgccggcaacggtaatgtcacgctcaacgaaggccgtgaagagcatgac
agctaccaggccgtgtcgtccaagcgcggcagtttcgtaagcggatcgaccaccggcacg
atgcagagcacgcaggccaatatcggtgtcgcgagcacggtctcgggcgattcagtggtg
gttcaagcgggcaaagacctgacggtccagggcagcaacgtcgtgggcacgaacgatgtg
acccttggcgccgcgcgcaacgtgcgcatcacgacctcgcaggacaccgtgcagacggcc
agcagctacgagaagacggactccgggctgctgaccaacggtgggctgtccctgtcgatc
ggcacgcgctcgcagtcgaaccagcagcaatccacccaggtcacgaacaccggcagcatg
gtcggttcgctcaacggcaacctgaccatcaccgccggcagcgacgcccacatcaccggc
agcaccatccatgcgggcaacgacctgaacgtggcgggcaagaccgtcacgatcgattct
gccttcgacacagcatcgcagtccgagcagcagcggttccgccaggcaggcgtgacggtg
gcgatcaccaatccggtcgtgtccgccatccagaccggccaacagatggcgagcgcggcc
aagcacgtggacggcgacccgcgcctgctcgcgctcgccgccgccacgaccggtctcgcc
gcgaagaacctctacgactcggtgggaggtgatccggtcaaggcagcgaccagtgtcggc
atcagcatctccgtcggcgccagcaagaacgacagccaatcgcagatgcagtccagcacg
gcggtcggcagcacggtctcggctggccgcaatgtgaccatcgcggcagcaggtgccggc
aaggacagcgatatcaatgtgattggcagcacggtctcgtcgggcaagagcaccctgctc
accgccgagggcgacgtcaacctgccggcggcacagagcgccagcagccagcgttcgacg
aacagcggtgcaagcgccgctcttggcgtatcgatcagcggtggttcgcagactggtatc
gcgctgaccgccagcgtgtcgggcagccggggccacgccgatggtgactcgaccgcctgg
accaacacgcatgtgagtgccggcaacaccctgacgattcagtcgggcggcgacacgaac
ctcaagggcgccgtggcttcaggtcagcaggtggtcgcgaatgttggcggcaacctcaac
gtcgaaagcctgcagaacacggatcattacgactccaagcagcaaagcgcgggcgtttcg
gtcagcgtgtgcgtgccgccgctgtgcattggcaagtccagcgtggccggcagcttcagc
cagaacaagctgaacaacgattacgcgggggtggcggagcagtcgggcatcaaggcgggc
gatggtggcttccaggtcggcgtcaagggcaacaccgacctgaagggcggcgtcatcgcc
agcagcgacaaagccgtgcaggagggcctgaacagcctgacaacggccacgctcacgcac
agcgacattcagaaccacgctaactacagcggctcgcaggtgggcatcagcggcgggtat
tcgttcggtgggggtagcacagacaagagcggtatcggcaaagaccagcagggcaaggcc
gacaacgtgaaccccgtgccgggcaccgagcaggcgagccatggcggtttcgttgccacg
ccgccggttgtgctgagtgcatcgggcagtgccagttcgaccacgcgcagcgcgatcagt
ggcggtgccatcaccattaccgatagcgccaagcagcagcaactgaccgggcagacggct
gccgagacggtggcgggcatcaaccggaatacgtcgaataccggcggggcactggcgccg
atctttgataaggacaagattcaggcgggctttgagattgcgagccagtttgtcaatcag
gtggggacgtttgttgagaaccggttgaaggaagtcgacgcggcgaaggaggcggccaag
aacccgaatctgacacccgaacaacgcgcgcaagcacagcaacgcgccgatcagttgact
gcggattgggggccgggtggcacttaccgacaggcgctgacggcactgacagtggcggcg
ggcggcaacgtgactggaggtatggggcagttcgcgcagaatgcgactgtcgcctacctg
caggaacttggcgcgaaccaagtcaaacagatcgcagacagccttggtagtgaggacgct
cgtgcggcactccacgcgattgtggggtgtgcaggcgcagcagccagcagccagagttgc
ggagccggcgcaatgggcgcggccgccagctctgtgctgggaagcttgctggggcggacg
gacgccatgacgccagaccagaagcaggcgcgtgtgaacctggtgaggagtgtggtggca
gggcttgcagcttccaccggcgtgaacgctgccacggcgacgagcgcaggccagatcgag
gtggagaacaatcaggtgtgggctccgcgcccgtcgccgccgccgccctcgcctggtcaa
ccgcaaaagcctttcgaaattccgggcttcaagggcgagacggctaagaagggtgatggg
gtcatcagcgatccgatgcagcaggtggatccgacggcgaacgttcacgccaacccggtt
agcgagcagacggggccgaagatccttgtttcgccgattgacatcatcaagacggcaatt
gagtacgtcattgcgtccgccaacaatcggatgccgataccggaaaaggttacggcggat
aatgggctacaggtagagtctaatccgaagcatacgccggggatgttggggagtaaccca
agggcgggcaccgagcccagaaactccttggatctatttaattcgtcgattcccggcgaa
gataacgcgcgatatgcaattgattccaagggaaatatcaatcggtactatgatgatggg
aatggcgtatatcattggtcaggctccactggagattcgggcaatcctctcaatgtatcg
aaaatccctgttgatgtgaaacgagcgcttggatttaaaggaaagtag
DBGET
integrated database retrieval system
