KEGG   Raphanus sativus (radish): 108805172
Entry
108805172         CDS       T06014                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 2 homolog 1
  KO
K12191  charged multivesicular body protein 2A
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108805172
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rsz04131]
    108805172
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rsz04147]
    108805172
Membrane trafficking [BR:rsz04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    108805172
Exosome [BR:rsz04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108805172
  Exosomal proteins of other body fluids (saliva and urine)
   108805172
  Exosomal proteins of colorectal cancer cells
   108805172
SSDB
Motif
Pfam: Snf7 PspA_IM30 PWI_CCDC43 Spc24 Cas9_a FerA
Other DBs
NCBI-GeneID: 108805172
NCBI-ProteinID: XP_018432646
UniProt: A0A6J0JC85
LinkDB
Position
5:31282028..31283677
AA seq 225 aa
MMNSIFGKRKTPAELLRENKRMLDKSIRDIERERQGLQTQEKKLITEIKKTAKQGQMGAV
KVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQAMGEAMKGVTKAMGQMNRQMNL
PSLQKIMQEFERQNEKMEMTSEVMGDAIDDALEGDEEEEETEDLVSQVLDEIGIDINQEL
VNAPSGAVAAPAGKNKVVQAEAAGAEDGGGIDSDLQARLDNLRKM
NT seq 678 nt   +upstreamnt  +downstreamnt
atgatgaattccatcttcggaaagcgaaaaactcccgcagaactactgcgggaaaacaag
aggatgctcgataagtcgatcagggacattgagagggagagacaaggtcttcagacacaa
gagaagaaacttattaccgagattaaaaagaccgcaaagcagggccagatgggagctgtg
aaagtgatggcaaaggaccttatcagaacacgacaccagattgagaagttttacaagctt
aaatcccagctccaaggtgtttctctcaggatccagactctcaaatcaacacaagcaatg
ggagaggcaatgaaaggtgtgactaaagcaatggggcaaatgaacaggcagatgaatctg
ccttctctgcagaaaatcatgcaagagtttgagaggcaaaacgagaaaatggagatgacc
tctgaggtgatgggagatgctattgatgatgccttggaaggagatgaggaagaggaagag
actgaagatcttgttagccaagtccttgacgagatcggtatcgatatcaaccaagagctg
gtgaatgctccatctggtgcggtggcagcaccagcaggaaagaacaaggtggtgcaagct
gaggcggcaggagctgaggacggtgggggaatagatagtgatcttcaggcaaggttggac
aaccttcgaaaaatgtga

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