KEGG   Raphanus sativus (radish): 108805188
Entry
108805188         CDS       T06014                                 
Name
(RefSeq) mRNA-decapping enzyme-like protein
  KO
K12611  mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    108805188
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rsz03019]
    108805188
Messenger RNA biogenesis [BR:rsz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     108805188
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     108805188
SSDB
Motif
Pfam: DCP1
Other DBs
NCBI-GeneID: 108805188
NCBI-ProteinID: XP_018432662
UniProt: A0A6J0JAN8
LinkDB
Position
5:22495102..22497800
AA seq 361 aa
MSQNGKLVPPNMDQNSTRLLNLTVLQRIDPFIEEILITAAHVTFYEFNIEISQWSRKDVE
GSLFVVKRNKQQPRFQFIVMNRRNTDNLVEDLLGDFEYEVQGPYLLYRNASQEVNGIWFY
NERECVEVARLFDRLLSAYSKANQKPNTSSSKSEFEELEAVPTMAAMDGPLEPSLTARDA
PNDPAFVNFFSSAMALGNTSSGTSSGPPYQSSPTPLQPHQPTVAPPAPPQPLQSSSPIMP
HFEYNPDLINSNPSVQIDLVTPSSFFAPPRTMTQPHLIPSSSTPTAPPLNFNNATHHQQR
QHGTPMLQPFPPPNPPPSLAPPAQSVPVINRDKVKQALLTLVQENEFIDMVTRALQNAHQ
P
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgtctcagaacgggaagctggtcccaccaaatatggatcagaacagtacgaggctcctc
aatctcacagttctccagcgaatcgatcctttcatagaggaaatccttatcacagcagct
cacgtcaccttctatgaattcaacatcgagattagtcaatggagtcgtaaggacgttgaa
gggtctttgtttgttgtcaaaagaaacaaacaacaacctcggtttcagtttattgtgatg
aatcgtcggaatacagataatctggtggaagatctcctgggagattttgagtacgaagtc
caaggtccatatttactttaccgtaacgcatctcaagaagtaaatggcatttggttctac
aatgaacgtgaatgtgtggaggttgcacgtcttttcgacagattacttagcgcctattcc
aaggcaaaccagaagccaaatacctcatcttcgaaaagcgagtttgaggaattggaagct
gtgcctacaatggcggctatggatggtcctcttgaaccatctttaactgctagagatgcc
cctaatgatcctgcttttgtcaacttctttagctctgcgatggctcttgggaacacttcg
agtgggacttcaagtggaccaccataccaatcatcaccaactcctctacaacctcaccaa
cccaccgttgcgcctcctgcacctccacagcctctgcaatcctcctctcctatcatgcct
cactttgagtacaaccctgatcttatcaatagcaaccccagcgttcagatcgatctggtg
acgccgtcctcgttctttgcacccccacggacgatgacacaaccacaccttattcctagt
tcatctacccccactgcgcctcctctgaactttaataatgcgactcaccatcagcagcgc
cagcatggtactccgatgctccagcctttcccaccaccaaatccaccaccctcactcgct
cctcctgcacaaagtgtcccagttatcaacagagacaaagtcaaacaagctcttttgacg
ctggttcaggagaatgaattcatcgacatggtgacccgagctttacaaaatgcacatcaa
ccatga

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