Raphanus sativus (radish): 108805217
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Entry
108805217 CDS
T06014
Name
(RefSeq) LIMR family protein At3g08930
KO
K14617
LMBR1 domain-containing protein 1
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
108805217
04980 Cobalamin transport and metabolism
108805217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108805217
Membrane trafficking [BR:
rsz04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
108805217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
DUF7801
Motif
Other DBs
NCBI-GeneID:
108805217
NCBI-ProteinID:
XP_056866774
UniProt:
A0A9W3DSH9
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Position
5:38244285..38246922
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AA seq
536 aa
AA seq
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MGDFNLALVIVAIVVCVIVFISSIYLLVNYQHPDDANQAYFPKFVVVFGLSIAMISILML
PADVANRHACRHAIYNGACNLTLPMKDLWLAVYIVDAILVFFVIPFAMFFYEGDQEKTMG
KRIKSALLWVVSTAVVCALVLGILYGVIGKVDFTVRHLASGTTSFPTSWQFSNNQPCIGN
TARQCSAFTASVASEKTWSMRTTFPEYVVALATIVGSVLFTIFGGVGIACLPLGLITAFI
RRPKAVITRSQYIKEATELGKKARELKKAADGLRQEEKSGAKGRAWRKNVKAVEKELLQL
EEDVNLLEEAYPQGEKVRRVYLTTISKFFELSNYSMVYFFSFQAETAWAFTVLGYLAKFI
LGIIGLIVSVAWIAHIIIYLLVDPPLSPFLNEVFIKLDDVWGLLGTAAFAFFCFYLLLAV
IAGAMMLGLKLVFITIHPMKWGATLMNSFLFNVGLILLCSISVIQFCATAFGYYAQATAA
QEIFGHTLQSLRGIKYLYKYNVFQIGFVILAGLTFLYYIAFGWRRKKPSARFQLSS
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatttcaacctcgctctcgtgatcgtcgcgatcgtcgtctgcgtcatcgtcttc
atctcaagcatctacctcctcgttaactaccagcacccggacgatgcgaaccaggcgtat
ttccccaagttcgtcgtcgtcttcggcctctccatcgccatgatatcgattctcatgttg
ccggccgacgtggcgaatcgtcacgcttgtcgtcacgcgatttacaacggcgcttgtaac
ctcacgttgcctatgaaggatctttggcttgctgtttacatcgttgacgctatcctcgtc
ttctttgttatcccttttgctatgtttttctatgaaggggaccaggaaaagactatgggg
aaaaggattaaaagtgccttgctttgggttgtaagcacggctgttgtttgtgctctggtg
ctcggtatcttatacggtgtcattggaaaggtggatttcactgtcaggcacttggcttct
ggcaccacctctttccctacttcctggcagttttcaaataatcaaccatgtatcggtaac
actgctcgccagtgctcagcatttacagctagtgtcgcatctgagaaaacgtggagcatg
cgtactacctttccagaatacgttgttgctcttgctaccattgttggttcagttcttttc
acgatatttggtggcgttggtattgcctgcctaccgttaggacttatcactgcgttcatc
cggcgaccaaaggctgttatcactcgatcacaatatataaaggaagcaactgaactaggg
aaaaaagctcgagaactaaagaaagcagcagatggacttcgccaggaagaaaaaagtggt
gcgaagggcagggcatggaggaaaaatgtgaaagcagttgaaaaggagttgctacaattg
gaggaagatgtgaacctcttagaagaagcgtatccccaaggagagaaggtaagacgagtg
tatctcacaactatatctaaattcttcgagttatccaactattctatggtctattttttt
tcctttcaggcagaaactgcttgggctttcactgtactcggatacttggccaagtttatt
cttggaatcataggattgatcgtttctgttgcttggattgcacatattataatatatctg
cttgtcgaccctcctctttccccttttcttaacgaggtttttattaagcttgatgacgtc
tggggtcttcttggcactgctgcctttgctttcttctgtttctaccttctactcgctgtt
atcgctggggcaatgatgctgggtttgaagcttgtcttcattaccattcatccgatgaaa
tggggagctactttaatgaactctttcctcttcaatgttgggctcattcttctctgttcc
atcagtgtgattcagttctgtgccactgcattcggatactacgctcaagccaccgctgct
caggagatctttggccacacattgcagtcacttcgaggaatcaagtatctctacaagtac
aacgtgttccaaatcgggtttgttatcctggctggattgaccttcctatattacatcgcc
ttcggatggagaagaaagaaacctagcgcccgtttccagctctcttcttaa
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