Raphanus sativus (radish): 108805225
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Entry
108805225 CDS
T06014
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG1
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108805225
Enzymes [BR:
rsz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108805225
Ubiquitin system [BR:
rsz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108805225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
vWA-TerF-like
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_5
RING_XB3-XBAT31
TerY_C
Sina_RING
Motif
Other DBs
NCBI-GeneID:
108805225
NCBI-ProteinID:
XP_018432711
UniProt:
A0A6J0JAT8
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Position
5:complement(77768..80878)
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AA seq
462 aa
AA seq
DB search
MGGGNSKEDWRQESPSSSSSSWASHQSYPQSGPGSYNYPPPPSFSPSPAAPSFGDHLPQP
PSYSQEQGYAYPYPPPQPQPQPSQSTHAASSSDRKKFDRRYSRISDNYASLDQVSEALGR
AGLESSNLILGIDFTKSNEWTGAKSFNKKSLHHISSNTPNPYEQAITIIGRTLASFDEDN
LIPCFGFGDASTHDQDVFSFYPEGISSNGFEQVLARYREIVPHLKLAGPTSFAPIIEMAM
TVVEQSSGQYHVLVIIADGQVTRSVDTEHGQLSPQEQRTVDAIVKASTLPLSIVLVGVGD
GPWDMMQEFDDNIPSRAFDNFQFVNFTEIMSKNKEQSRKETEFALSALMEIPPQYKATIE
LGLLGRRNGSIPERIPLPPPVQSGSTFFNPSKASPIPNFEPSVPTYPMETKDVDDNQLCP
ICLSNPKNMAFGCGHQTCYECGPGLKVCPICRAPIQTRIKLY
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggaggaggaaattctaaagaagattggaggcaagagtcgccatcttcatcatcatca
tcatgggcgtctcatcagagttatcctcagtctggaccaggcagctacaactaccctcct
ccaccctctttttctccatctcctgcggctcccagttttggtgatcatcttcctcaaccg
ccttcttatagtcaagagcagggctatgcttatccttatcctcccccacagccacagcca
cagccttcgcagagtactcatgctgcttcttcttctgatagaaaaaagtttgatcgtagg
tattccagaatatctgataattacgcttctttagatcaggtgtcagaggctctagggcgt
gcaggtcttgaatcttctaatcttatcctcggtattgatttcaccaaaagcaatgaatgg
acaggcgccaagtccttcaataagaaaagcttgcatcatatcagcagcaatactcccaat
ccttatgaacaagctatcactatcattggaagaaccttagcctcctttgacgaggacaac
ttaattccttgttttggttttggtgacgcatcaactcatgatcaagacgtgtttagtttc
tatccagagggtatatcctctaatggatttgagcaagttttggctcgctacagagagatt
gtccctcaccttaagctcgcaggaccgacatcttttgcacccatcattgaaatggcgatg
acagtggttgagcagagtagtggccaatatcatgtgttagtgatcatagccgatggacag
gtaacaagaagtgtggatacggaacatgggcagttaagtccccaggaacagaggactgtt
gatgcaattgtgaaagcaagtactcttcctttgtcaatagtgttagtcggggtgggggat
ggaccatgggacatgatgcaggaatttgatgataacataccttcccgagcttttgataac
ttccaatttgtgaacttcacggagatcatgtcgaagaacaaagagcagtctcggaaggag
acagaattcgcactctctgctctcatggagattcctccacagtacaaagctaccatcgag
cttggccttttagggcgaagaaatgggagtatcccagagagaatcccacttccacctccg
gtgcagagcggttcaacattcttcaacccctccaaagcttccccaataccgaattttgaa
cctagtgtacctacttatcccatggaaaccaaggatgttgacgataatcagctatgcccg
atatgtctgagcaatcctaaaaacatggcgtttggttgcggccatcagacatgttatgaa
tgcggtccaggccttaaggtgtgtcctatttgtcgtgcacccatccagaccagaattaag
ctctactaa
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