KEGG   Raphanus sativus (radish): 108805258
Entry
108805258         CDS       T06014                                 
Name
(RefSeq) calnexin homolog 1
  KO
K08054  calnexin
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz04141  Protein processing in endoplasmic reticulum
rsz04145  Phagosome
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108805258
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    108805258
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:rsz03110]
    108805258
   04131 Membrane trafficking [BR:rsz04131]
    108805258
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:rsz04091]
    108805258
Chaperones and folding catalysts [BR:rsz03110]
 Other chaperones and cochaperones
  Calnexin / calreticulin
   108805258
Membrane trafficking [BR:rsz04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Others
    108805258
 Autophagy
  ER-phagy
   Other ER-phagy associated proteins
    108805258
Lectins [BR:rsz04091]
 L-type lectins
  108805258
SSDB
Motif
Pfam: Calreticulin CFAP143
Other DBs
NCBI-GeneID: 108805258
NCBI-ProteinID: XP_018432759
UniProt: A0A6J0JD09
LinkDB
Position
5:34066597..34069361
AA seq 549 aa
MMRDRQLFSGLLLILAFVSLQKLCYCDDQTVLYESFDEAFDGRWIVSKNGDYEGVWKHAK
SEGHDDYGLLVSEKARKYGIVKELDEPLNLKDGTIVLQYEVRFQEGLECGGAYLKYLRPQ
EAGWTAEGFNSESPYSIMFGPDKCGATNKVHFILKHKNPKSGEYVEHHLKFPPSVPHDKL
SHVYTAVLKPDNEVTILVDGEEKKKADLLSREDFEPALIPDKTIPDAEDKKPEDWDERAK
IPDPNAVKPEDWDEDAPMEIEDEEAEKPEGWLDDEPEEVDDPEATKPEDWDDEEDGMWEA
PKVDNPKCETAPGCGEWKRPMKRNPAYKGKWSAPLIDNPAYKGIWKPRDIPNPDYFELDR
PDFEPIAAIGIEIWTMQDGILFDNMLIAKDEKVAESYRQTTWKPKFDVEKEKQKAEEEAA
GSTADGLKSYQKVVFDLLNKVADISFLSAYKSKITEVIEKAEQQPNVTIGVLVSIVVVFL
SIFIRLIFGGKKQAAAASVEKKKPEVGESSKNGETQPDSDIKPPAGGIQSKKVMYNTDPN
EYRRTNPNT
NT seq 1650 nt   +upstreamnt  +downstreamnt
atgatgagagaccggcaactattttccggccttttgcttatcttagcattcgtttcgctc
cagaagctttgctactgtgacgatcagacagtgttgtatgaatcgttcgatgaggcattc
gatggtcgctggatagtttcgaagaatggtgattacgaaggtgtatggaagcatgcaaag
agcgagggacatgatgactacggacttctcgtgagcgagaaagcccgtaagtacggcata
gtgaaagagctcgacgagcctctaaacctcaaggacggaacaatcgttctccagtacgag
gttcgtttccaggaagggctagagtgcggtggtgcttacttaaaatacctccgtcctcaa
gaagccggatggacagccgagggtttcaacagcgaatcaccttactccatcatgtttggg
cctgacaagtgtggagccacgaacaaagtgcatttcatcttgaagcacaagaaccccaag
agcggcgagtacgttgagcaccacttgaagttccctccctctgttcctcacgacaagctt
tcacatgtctacaccgccgttttgaaacccgacaacgaggttacgattctggttgatgga
gaggagaagaaaaaggctgatttgctctctagagaagactttgagcctgcgttgatccct
gacaagacaatccctgacgctgaagacaagaagccagaggactgggatgagagagccaag
attcctgatcctaacgcggtgaagcctgaggactgggacgaggatgcaccgatggagatt
gaagatgaggaagctgagaaaccggaaggatggttagacgatgagcctgaggaggtggat
gatccagaggcgaccaaacctgaagattgggatgacgaggaagatggtatgtgggaggca
ccaaaagttgacaaccccaagtgtgagacagcaccagggtgtggggaatggaagagaccg
atgaagaggaaccctgcatacaaggggaagtggagtgcacctctgatagacaaccctgct
tacaagggaatctggaagcccagagacatccctaaccctgactactttgagctagacagg
ccagatttcgagcccattgcagccataggtatagagatctggacgatgcaagacggtatc
ttgtttgacaacatgttgatagcgaaagacgagaaggtcgctgagagttacaggcagacc
acttggaagcctaagtttgacgttgagaaagagaaacaaaaagcagaagaggaagctgct
ggctctactgcagatggtctcaagagctaccagaaggttgtgtttgacctcttgaacaag
gttgcagacatatctttcctaagtgcgtacaagtctaagatcacggaagtgattgagaaa
gcggagcaacaacctaatgtaaccattggtgtcctcgtctccattgttgtagtattcttg
tcgatcttcatcaggcttatcttcgggggcaagaagcaagcggcggcggcaagtgtggaa
aagaagaaaccagaagtaggagagagctcaaagaatggggagacgcaacccgacagtgat
ataaagcccccagccggagggatccaaagcaagaaagtcatgtacaacaccgacccgaat
gaatatcgccgaaccaacccgaacacttga

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