Raphanus sativus (radish): 108805258
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Entry
108805258 CDS
T06014
Name
(RefSeq) calnexin homolog 1
KO
K08054
calnexin
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04141
Protein processing in endoplasmic reticulum
rsz04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108805258
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
108805258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
rsz03110
]
108805258
04131 Membrane trafficking [BR:
rsz04131
]
108805258
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
rsz04091
]
108805258
Chaperones and folding catalysts [BR:
rsz03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
108805258
Membrane trafficking [BR:
rsz04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
108805258
Autophagy
ER-phagy
Other ER-phagy associated proteins
108805258
Lectins [BR:
rsz04091
]
L-type lectins
108805258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
CFAP143
Motif
Other DBs
NCBI-GeneID:
108805258
NCBI-ProteinID:
XP_018432759
UniProt:
A0A6J0JD09
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Position
5:34066597..34069361
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AA seq
549 aa
AA seq
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MMRDRQLFSGLLLILAFVSLQKLCYCDDQTVLYESFDEAFDGRWIVSKNGDYEGVWKHAK
SEGHDDYGLLVSEKARKYGIVKELDEPLNLKDGTIVLQYEVRFQEGLECGGAYLKYLRPQ
EAGWTAEGFNSESPYSIMFGPDKCGATNKVHFILKHKNPKSGEYVEHHLKFPPSVPHDKL
SHVYTAVLKPDNEVTILVDGEEKKKADLLSREDFEPALIPDKTIPDAEDKKPEDWDERAK
IPDPNAVKPEDWDEDAPMEIEDEEAEKPEGWLDDEPEEVDDPEATKPEDWDDEEDGMWEA
PKVDNPKCETAPGCGEWKRPMKRNPAYKGKWSAPLIDNPAYKGIWKPRDIPNPDYFELDR
PDFEPIAAIGIEIWTMQDGILFDNMLIAKDEKVAESYRQTTWKPKFDVEKEKQKAEEEAA
GSTADGLKSYQKVVFDLLNKVADISFLSAYKSKITEVIEKAEQQPNVTIGVLVSIVVVFL
SIFIRLIFGGKKQAAAASVEKKKPEVGESSKNGETQPDSDIKPPAGGIQSKKVMYNTDPN
EYRRTNPNT
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgatgagagaccggcaactattttccggccttttgcttatcttagcattcgtttcgctc
cagaagctttgctactgtgacgatcagacagtgttgtatgaatcgttcgatgaggcattc
gatggtcgctggatagtttcgaagaatggtgattacgaaggtgtatggaagcatgcaaag
agcgagggacatgatgactacggacttctcgtgagcgagaaagcccgtaagtacggcata
gtgaaagagctcgacgagcctctaaacctcaaggacggaacaatcgttctccagtacgag
gttcgtttccaggaagggctagagtgcggtggtgcttacttaaaatacctccgtcctcaa
gaagccggatggacagccgagggtttcaacagcgaatcaccttactccatcatgtttggg
cctgacaagtgtggagccacgaacaaagtgcatttcatcttgaagcacaagaaccccaag
agcggcgagtacgttgagcaccacttgaagttccctccctctgttcctcacgacaagctt
tcacatgtctacaccgccgttttgaaacccgacaacgaggttacgattctggttgatgga
gaggagaagaaaaaggctgatttgctctctagagaagactttgagcctgcgttgatccct
gacaagacaatccctgacgctgaagacaagaagccagaggactgggatgagagagccaag
attcctgatcctaacgcggtgaagcctgaggactgggacgaggatgcaccgatggagatt
gaagatgaggaagctgagaaaccggaaggatggttagacgatgagcctgaggaggtggat
gatccagaggcgaccaaacctgaagattgggatgacgaggaagatggtatgtgggaggca
ccaaaagttgacaaccccaagtgtgagacagcaccagggtgtggggaatggaagagaccg
atgaagaggaaccctgcatacaaggggaagtggagtgcacctctgatagacaaccctgct
tacaagggaatctggaagcccagagacatccctaaccctgactactttgagctagacagg
ccagatttcgagcccattgcagccataggtatagagatctggacgatgcaagacggtatc
ttgtttgacaacatgttgatagcgaaagacgagaaggtcgctgagagttacaggcagacc
acttggaagcctaagtttgacgttgagaaagagaaacaaaaagcagaagaggaagctgct
ggctctactgcagatggtctcaagagctaccagaaggttgtgtttgacctcttgaacaag
gttgcagacatatctttcctaagtgcgtacaagtctaagatcacggaagtgattgagaaa
gcggagcaacaacctaatgtaaccattggtgtcctcgtctccattgttgtagtattcttg
tcgatcttcatcaggcttatcttcgggggcaagaagcaagcggcggcggcaagtgtggaa
aagaagaaaccagaagtaggagagagctcaaagaatggggagacgcaacccgacagtgat
ataaagcccccagccggagggatccaaagcaagaaagtcatgtacaacaccgacccgaat
gaatatcgccgaaccaacccgaacacttga
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