Raphanus sativus (radish): 108805273
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Entry
108805273 CDS
T06014
Name
(RefSeq) probable U3 small nucleolar RNA-associated protein 7
KO
K14768
U3 small nucleolar RNA-associated protein 7
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rsz03009
]
108805273
Ribosome biogenesis [BR:
rsz03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
108805273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BING4CT
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WD40
ANAPC4_WD40
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Cytochrom_D1
Beta-prop_WDR75_1st
WDR54
Beta-prop_Vps41
PEP5_VPS11_N
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
108805273
NCBI-ProteinID:
XP_018432775
UniProt:
A0A6J0JAW0
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Position
5:3747071..3749929
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AA seq
535 aa
AA seq
DB search
MEVALEDNNLMEKVVLTPDEQEMDVELEAKEKKYLRGEGANLETLKDKKLKTQLASREKL
YGKSAKAAAKIEKWLLPASAGYLETDGLEKTWRIKQTDIAKEVDILSSRNQYDIVLPDFG
PYKLDFTASGRHMLAGGRKGHLALVDMMNMNLIKEIQVRETVRDVAFLHNDQFFAAAQKK
YAYIYGRDGTELHCLKERGPVARLRFLKNHFLLASVNKIGQLHYQDVTYGDMVASIRTGK
GRTDVMEVNPYNGVVALGHSGGTVTMWKPTSQAPLVQMQCHPGPVSSLAFHPNGHLMATS
GKERKVKIWDLRKFEEVQTIHGFHAKTLSFSQKGLLAAGTGSFVQVLGDSSGAYSRYMSH
SMVKGYQIEKVMFRPYEDVLGIGHSMGWSSVLIPGSGEPNFDSWVANPFETSKQRREKEV
HLLLDKLPPETIMLDPSKIGAMRPSRRKEKPTRGEVEAEKEVAIEAAKSVEMKKKTKGRN
KPSKRTKKKKELVENVKRTFPEQEHSAAGKKRRIGGEDDAAAELPACLKRFARTN
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgctttagaggataacaatctcatggagaaggtggtattgactcctgatgag
caggagatggatgttgagttggaggctaaagagaagaagtatctaagaggagaaggtgct
aatctagagacgttgaaggacaagaagctaaagactcaactcgcttcacgagagaaattg
tatgggaagtctgcaaaagctgctgccaagatcgagaagtggctcttgccggcttcagca
gggtacttggagactgatggtttagagaagacgtggcggatcaagcagacagatatcgcc
aaagaagtagatatattaagctcaagaaaccaatatgacattgtgctcccagattttggg
ccgtacaaacttgattttactgcaagtggacggcatatgctagctggtggtcgcaaaggc
caccttgctcttgtagacatgatgaatatgaacctaattaaagagatccaggtaagggaa
acagtacgtgatgttgcattcctgcacaatgaccaattctttgcagctgcccagaagaag
tatgcttatatttatgggagagatggaactgagctccactgtttgaaggaacgtggtcca
gtggctagactcaggttcctaaagaaccatttcctgcttgcatcagtgaacaaaatcgga
cagctacattaccaagacgtgacctacggtgacatggtagctagtatccgaacaggcaaa
ggcagaacagacgtaatggaagtgaacccttacaacggtgttgtcgccttgggacactct
ggtggaaccgtcacgatgtggaaaccaactagccaagcacctctagtccagatgcagtgt
caccctggtccagtctcctctctcgccttccatccaaacggccatctcatggctacatcg
ggcaaagagcgcaaagtcaagatctgggatctgcgcaagttcgaggaggtccagaccatt
cacggcttccacgccaagacgctgagtttcagccagaaaggtttgctagcagctggaacc
ggatcgtttgttcaggttttaggagactcgagcggtgcttacagcagatacatgagccac
tcgatggtgaaaggctaccagatcgagaaggttatgttcagaccgtacgaggatgttctc
gggattggccactcgatgggttggtctagcgtcctcataccagggtctggagaaccgaac
ttcgattcttgggtggctaacccgtttgaaacgtcgaaacagagacgtgagaaggaagtg
cacctgcttcttgataagctcccgcctgagacgatcatgcttgatccttctaagataggt
gccatgagaccttcgaggaggaaggagaagccaacgagaggagaggtggaagctgagaaa
gaggtggcgatagaagcagcgaagagcgttgagatgaagaagaagactaaaggaaggaac
aaaccgagtaagaggactaagaagaagaaggagttggtggagaatgtaaagaggacgttc
ccggagcaagagcacagcgctgcaggtaagaagagaagaataggtggtgaagatgatgct
gcggcagagcttcccgcatgtttgaaaaggtttgccagaacaaactga
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