Raphanus sativus (radish): 108805275
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Entry
108805275 CDS
T06014
Name
(RefSeq) LIMR family protein At3g08930
KO
K14617
LMBR1 domain-containing protein 1
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
108805275
04980 Cobalamin transport and metabolism
108805275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108805275
Membrane trafficking [BR:
rsz04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
108805275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
DUF7801
Motif
Other DBs
NCBI-GeneID:
108805275
NCBI-ProteinID:
XP_018432779
UniProt:
A0A6J0JD34
LinkDB
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Position
5:38229241..38232990
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AA seq
509 aa
AA seq
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MGDFNLALVIVAIVVCVIVFISSIYLLVNYQHPDDANQAYFPKFVVVFGLSIAMISILML
PADVANRHACRHAIYNGACNLTLPMKDLWLAVYIVDAILVFFVIPFAMFFYEGDQEKTMG
KRIKSALLWVVSTAVVCALVLGILYGVIGKVDFTVRHLASGTTSFPTSWQFSNNQPCIGN
TARQCSAFTASVASEKTWSMRTTFPEYVVALATIVGSVLFTIFGGVGIACLPLGLITAFI
RRPKAVITRSQYIKEATELGKKARELKKAADGLRQEEKNGAKGRAWRKNVKAVEKELLQL
EEDVNLLEEAYPQGEKAETAWAFTVLGYLAKFILGIIGLIVSVAWIAHIIIYLLVDPPLS
PFLNEVFIKLDDVWGLLGTAAFAFFCFYLLLAVIAGAMMLGLKLVFITIHPMKWGATLMN
SFLFNVGLILLCSISVIQFCATAFGYYAQATAAQEIFGHTLQSLRGIKYLYKYNVFQIGF
VILAGLTFLYYIAFGWRRKKPSARFQLSS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatttcaacctcgctctcgtgatcgtcgcgatcgtcgtctgcgtcatcgtcttc
atctcaagcatctacctcctcgtcaactaccagcacccggacgatgcgaaccaggcgtat
ttccccaagttcgtcgtcgtcttcggcctctccatcgccatgatatcgattctcatgttg
cctgccgacgtggcgaatcggcacgcttgtcgtcacgcgatttacaacggcgcttgtaac
ctcacgttgcctatgaaggatctctggcttgcggtttacatcgttgacgctatcctcgtc
ttctttgttatcccctttgctatgtttttctatgaaggggaccaggaaaagactatgggg
aaaaggattaaaagtgccttactttgggttgtaagcacggctgttgtctgtgctctggtg
ctcggtatcttatacggtgtcattggaaaggtggacttcactgtcaggcacttggcttct
ggcacgacctctttccctacttcctggcagttttcaaataatcagccatgtatcggtaac
actgctcgtcagtgctcagcatttacagctagtgtcgcatctgagaaaacgtggagcatg
cgtactacctttccagaatacgttgttgctcttgctaccattgttggttcagttcttttc
acgatatttggtggcgttggtattgcctgcctgccattaggacttatcactgcattcatc
cggcgaccaaaggctgttatcactcgatcacaatatataaaggaagcaactgagctaggg
aaaaaggctcgagaactaaagaaagcagctgatggacttcgtcaggaagaaaaaaatggt
gctaagggcagggcatggaggaaaaatgttaaagcagttgaaaaggagttactccaattg
gaggaagatgtgaacctcttagaagaagcgtatccgcaaggagagaaggcagaaactgct
tgggctttcactgtactcggatacttggccaagtttattcttggaatcataggattgatc
gtttctgttgcttggattgcgcatattattatatatctgcttgtcgaccctcctctttcc
ccttttcttaacgaggtttttattaagcttgatgacgtctggggtcttcttggaactgct
gcctttgctttcttctgtttctaccttctactcgctgttatcgctggggcaatgatgctg
ggtttgaagcttgtcttcattaccattcatccgatgaaatggggagctactttaatgaac
tctttcctcttcaatgttgggctcattcttctttgttccatcagtgtgattcagttctgt
gccactgcatttggatactacgctcaagccactgctgctcaggagatctttggccacaca
ttgcagtcacttcgaggaatcaagtatctctacaagtacaacgtgttccaaatcgggttt
gttatcctggctggattgaccttcctatattacattgccttcggatggagaagaaagaaa
cctagcgcccgtttccagctctcttcttaa
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