Raphanus sativus (radish): 108805386
Help
Entry
108805386 CDS
T06014
Name
(RefSeq) protein SCARECROW
KO
K27742
protein SCARECROW
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108805386
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Other transcription factors
GRAS
108805386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GRAS
Motif
Other DBs
NCBI-GeneID:
108805386
NCBI-ProteinID:
XP_018432923
UniProt:
A0A6J0JBA6
LinkDB
All DBs
Position
5:24459323..24462084
Genome browser
AA seq
634 aa
AA seq
DB search
MAESSGRTTSSDNTSTNRTVPPLPPPASAMVRKRLASEMSSSPSLNNNQRLPPPHRVSHL
PDSSSNYIITPDSTTHPTPPVSVCGFSGLPVFPSDNNRTTTAMSVQPMEQQQQQQQQDSS
ASSSSSPTVWVDAIIRDLINSSASVSIPQLIQNVRDIIFPCNPNLGALLEYRLRSLMLLD
PPPSSDPPPPFDSISQYHQISNNPSPPPLTQQQQQQQPKPPPPPPVQQQERENSPPPPET
VTTTNTNTAEALRERKEEIKRQKQDEEGLHLLTLLLQCAEAVSADNLEEANKLLLEISQL
STPYGTSAQRVAAYFSEAMSARLLNSCLGIYAALPSRWMPQTHSLKMVSAFQVFNGISPL
VKFSHFTANQAIQEAFEKEDCVHIIDLDIMQGLQWPGLFHILASRPGGPPHVRLTGLGTS
MEALQATGKRLSDFADKLGLPFEFCPLAEKVGNLDAERLNVRKREAVAVHWLQHSLYDVT
GSDTHTLWLLQRLAPKVVTVVEQDLSHAGSFLGRFVEAIHYYSALFDSLGASYGEESEER
HVVEQQLLSKEIRNVLAVGGPSRSGEVKFESWREKMQQCGFKGISLAGNAATQATLLLGM
FPSDGYTLVDDNGTLKLGWKDLSLLTASAWTPCS
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggcggaatcaagcggtagaaccacttcttccgacaacaccagcaccaaccgtactgtt
cctcctcttcctcctcctgcttcagctatggtgagaaagagattagcttccgagatgtct
tcatctccttccttaaacaacaaccaacgtcttccccctcctcaccgcgtctcacacctc
cctgactcctcctccaactacatcatcacgcctgactcgacaacccacccgacaccaccc
gtctccgtctgcggcttctccggccttccggtttttccttccgacaacaaccggacaaca
acagccatgtccgtacaaccaatggaacaacaacaacaacaacaacaacaagactcctct
gcttcatcttcttcttcaccaacggtctgggtggacgccatcatcagagacttaatcaac
tcctcagcttcggtctctatccctcagcttatccaaaacgtcagagacatcatcttccct
tgtaaccctaacctcggcgctcttctcgagtacagactccgctctctcatgcttctcgat
cctcctccttcctccgaccctcctcctcctttcgactccatctctcaataccatcagatc
tccaacaacccttctcctcctcctctaacacaacaacaacaacaacaacagcccaaacct
cctcctcctcctccggttcagcagcaagagagagagaactctccaccaccgcccgagact
gttaccaccacaaacacaaacacggcggaggcgttgagagagagaaaagaagagatcaaa
agacagaaacaagacgaggaaggcctccacctcctcactctcctcctccagtgcgccgaa
gccgtctccgcggacaacctcgaggaagccaacaagctcctcctcgagatctctcagctc
tccactccctacggaacctccgcgcagcgcgtcgccgcctacttctccgaagccatgtcc
gctcgcctcctcaactcctgcctcggcatctacgccgccctcccttcccgctggatgccc
cagacccacagcctcaagatggtctccgccttccaggtcttcaacgggatcagccccctc
gtcaagttctcccacttcacggccaaccaggcgatccaggaggccttcgagaaagaggac
tgcgtccacatcatcgatctcgacatcatgcaggggcttcagtggcctggtctgtttcat
atactcgcttctagacctggtggtcctcctcacgtgcgtctcacgggacttggtacttct
atggaagctcttcaggctactgggaagcgtctttcggatttcgcggataagctcggcttg
ccttttgagttctgtcctttggctgagaaagttgggaacttggatgctgagagacttaat
gtgaggaagagagaagctgttgctgttcattggcttcagcattctctttatgatgttact
ggctctgatacacacactctatggttactccaaagattagctccaaaggtggtgacagta
gtggaacaagacttgagccatgctggttctttccttggaagatttgtggaagcgatacat
tactactcggcgctgtttgattccttgggagctagctacggagaagagagcgaggagaga
cacgtggtggagcagcagctgctgtccaaagagataaggaacgtattggctgttggtgga
ccgtcgaggagcggcgaagtgaagttcgagagctggagggagaagatgcagcagtgtgga
ttcaaagggatatctttggctgggaacgcagcgacgcaggcgacgcttttgctggggatg
tttccgtcggatggttatactttggttgatgataatggtacgcttaagcttggatggaaa
gatctctcgttacttactgcttcagcttggactccttgttcttag
DBGET
integrated database retrieval system