Raphanus sativus (radish): 108805661
Help
Entry
108805661 CDS
T06014
Name
(RefSeq) syntaxin-71
KO
K08506
syntaxin of plants SYP7
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108805661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108805661
Membrane trafficking [BR:
rsz04131
]
SNARE
SNAP-25[C] (Qc)
Syp7
108805661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
DUF848
4HB_KIF14
Ran-binding
Uso1_p115_C
Motif
Other DBs
NCBI-GeneID:
108805661
NCBI-ProteinID:
XP_018433096
UniProt:
A0A6J0JDI2
LinkDB
All DBs
Position
6:complement(1103953..1106258)
Genome browser
AA seq
265 aa
AA seq
DB search
MTVIDILTRVDSICKKYDKYDVDKQREANVSGDDAFARLYGAFETQIETALEKAELVTKE
KNRASAVAMNAEIRRTKARLSEEVPKLQRLAVKRVKGLTTEELAARNDLVLALPARIDAI
PDGTAGGPKATNAWAPSTASRPDIKFDSDGRFDDDYFQESHESSQFRQEYEMRKIKQEQG
LDMISEGLDALKNMASDMNEELDRQVPLMDEIDSKVDRATSDLKNTNVRLKDTVNQLRSS
RNFCIDIVLLCIVLGIAAYLYNVLK
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgacagtgatcgatattttgactagagttgactcgatctgtaagaagtacgacaagtac
gatgtcgacaaacagcgtgaggctaatgtctctggcgatgatgctttcgctcgtctctat
ggcgctttcgagacccaaatcgagactgctctcgagaaagctgaacttgttaccaaggag
aagaacagggcttctgctgttgcaatgaacgctgagatccgcaggactaaggctaggttg
tctgaggaagttcccaagttgcagagacttgctgttaagcgggtcaagggccttacaacc
gaagagcttgctgctagaaatgatttggtccttgcgcttccggccaggattgacgccata
cctgatggaacagctggtggccctaaagccaccaatgcttgggctccttcaacagcatct
cgtcctgatatcaagtttgattcagatgggcgttttgatgatgattactttcaagaatca
catgaatctagccagttcagacaagagtatgagatgcggaaaatcaagcaggaacaaggt
ctggacatgatctccgaaggtttagatgctttgaagaatatggcgtctgatatgaacgag
gagctggatcggcaagttcctctgatggatgaaatcgactccaaggtggacagagcaacc
tcggatcttaagaacaccaatgttagacttaaagatactgtgaaccagctgaggtcaagc
cggaacttctgcatcgatattgttttgctgtgtattgtgttgggcatcgctgcatactta
tacaatgtactgaagtaa
DBGET
integrated database retrieval system
