Raphanus sativus (radish): 108805707
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Entry
108805707 CDS
T06014
Name
(RefSeq) vesicle transport v-SNARE 12
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108805707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108805707
Membrane trafficking [BR:
rsz04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
108805707
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE
V-SNARE_C
Sec20
YqjK
RIFIN
DUF5741
Fusion_gly
FliJ
Motif
Other DBs
NCBI-GeneID:
108805707
NCBI-ProteinID:
XP_018433142
UniProt:
A0A6J0JC10
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All DBs
Position
6:complement(35874878..35876762)
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AA seq
222 aa
AA seq
DB search
MSEVFEGYERQYCELSTNLSRKCHSASLLPHGEEKKEKLVEIKSGMDEADVLIRKMDLEA
RSLQPSAKAVCLSKLREYKSDLNQLKKEFKRVSSPDANQSTREELLESGLADVHAVSADQ
SGRLAMSMERLDQSSDRIRESRRLMLETEEVAISVVENLSQQRQTLLHAHSKLQGVDDAI
DKSKKVLTAMSRRMSRNKWIVGSVIVALILAIILIISYKLSH
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggtatttgaagggtacgagagacagtactgcgagctctcaaccaatctctcc
agaaaatgtcattctgcctcgcttctcccccacggagaagagaagaaggagaagcttgtt
gagatcaagtctggaatggacgaggctgatgtcttgatccggaaaatggatcttgaggca
agaagtttgcagccgagtgctaaagctgtctgtctttccaaactaagagagtataaatct
gatttgaaccaactcaagaaagaattcaaacgagtctcttccccagatgctaaccaatct
acacgtgaagaacttctggaatccggattggctgatgtgcacgcggtatcagctgatcag
agcgggagattggcaatgtcaatggagaggcttgaccaatcaagcgacagaatcagggag
agtagaagactaatgctggagacagaagaggttgctatttcagttgttgaaaatctcagt
cagcaacgccaaaccctccttcacgctcactctaagcttcagggtgtggatgatgccatt
gacaagagtaagaaagtgttgactgctatgtctagaagaatgtcgaggaacaaatggatc
gttggttccgtcatcgtggctctcattctcgccatcatcttgatcatctcatacaagctt
tctcattga
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