Raphanus sativus (radish): 108805729
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Entry
108805729 CDS
T06014
Name
(RefSeq) ubiquitin-like modifier-activating enzyme atg7
KO
K08337
ubiquitin-like modifier-activating enzyme ATG7
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
108805729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108805729
04121 Ubiquitin system [BR:
rsz04121
]
108805729
03029 Mitochondrial biogenesis [BR:
rsz03029
]
108805729
Membrane trafficking [BR:
rsz04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
108805729
Atg8 conjugation proteins
108805729
Ubiquitin system [BR:
rsz04121
]
Ubiquitin-activating enzymes (E1)
UBL-activating enzymes
108805729
Mitochondrial biogenesis [BR:
rsz03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
108805729
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG7_N
ThiF
DUF4123
rRNA_methylase
Shikimate_DH
Motif
Other DBs
NCBI-GeneID:
108805729
NCBI-ProteinID:
XP_018433160
UniProt:
A0A6J0JC14
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Position
6:complement(20725882..20729211)
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AA seq
697 aa
AA seq
DB search
MDDNRQSPSTTILQFAPLNSSVDEGFWHSFSSLKLDKLGIDDSPIPITGFYAPCSHPQVS
NHLTLLSESLLLSSDQQSSSIHGNRNKCPVPGTLYNTNTVESFTKLDKQSLLKAEANKIW
EDIQSGKALEDCACLARFFVISFADLKKWSFRYWFAFPALVLDPPASLVQLKPASQHFTL
EEAESVSAACNEWRDSSLTTDVPFFLVSVSSDDSKATIRHLKDWEPCQGDDHHKLLFGFY
DPCHLPSNPGWPLRNYLALIRSKWNLETVLFFCYRESRGFADMSLSLVGQASITLLPSDE
TVPSSVGWELNKGKRAPRSISLANSMDPTRLAVSACDLNLKLMRWRALPSLDLNVLSSVK
CLLLGAGTLGCQVARTLMGWGIRNITFVDYGKVAMSNPVRQSLYTFEDCLGRGEFKAVAA
VKSLKQIFPAMESSGVVMAIPMPGHPISSQEEESVLGDCKRLRDLIESHDAVFLLTDTRE
SRWLPSLLCANANKIAINAALGFDSYMVMRHGAGPTSLTDEMQNLDMNKTGRRRLGCYFC
NDVVAPQDSMTDRTLDQQCTVTRPGLAPIAGALAVELLVGVLQHPLGIYAKGDNSRSSSG
GNTDESPLGILPHQIRGSVSQFSQITLLGQASNSCTACSETVVSEYREKGNSFILEAINH
PTYLEDLTGLTELKKAANSFSLDWEDDDDDDDEAVDM
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggacgataatagacaatctccatcgacgacgatacttcaattcgctccattgaacagc
tccgtcgacgaaggtttctggcacagcttctcctctctgaaactcgataagctcggaatc
gacgattctccgatccccatcaccggtttctatgcaccgtgttcacatccacaagtctca
aaccatctcactcttctttccgagtcgttattgctttcttcagatcaacagtcatcgtcg
attcacgggaataggaacaagtgtcctgttccagggactctctacaacaccaacaccgtc
gaaagctttactaaactcgacaaacaaagcttgttaaaagcagaagcaaacaagatttgg
gaagatattcaatcgggaaaagcactcgaggactgtgcttgtttagctaggttctttgtt
atctcctttgctgaccttaagaagtggagttttcgttattggtttgcgttccctgctctt
gtgcttgatcctcctgcgagcttggttcaattaaagccagcttcacagcattttacttta
gaagaagcagaatcagtatctgctgcttgtaatgagtggagagactcaagtttaactaca
gatgttccgttctttctggtttcggtttcttctgatgattcaaaagctaccatcagacat
cttaaagactgggaaccttgccaaggtgatgatcatcataagttgcttttcggtttctat
gacccgtgtcacctccctagtaatcctggctggccacttcgaaattatctagcactgatt
cgctcaaagtggaacctagagactgttttgttcttctgctacagagagagtcgcggtttc
gctgacatgagcctttcccttgttggtcaagcctccattacacttcttccatcagatgag
actgtacctagctcagtgggatgggagcttaacaaaggcaaacgagctccccgatccatt
agccttgctaactccatggatccaacaaggttggctgtttctgcttgtgatttaaactta
aagttaatgagatggcgtgcgttaccgtctctagacttaaacgttctctcctctgtgaaa
tgccttcttctcggagctggtacattgggttgccaagttgctcgtactcttatgggttgg
ggaatccgcaacataacctttgttgactacggcaaagtagccatgtctaatccagtcagg
caatctctctacacgtttgaagactgcctaggccgcggcgagttcaaagccgttgctgct
gttaaaagccttaaacagatctttccagcgatggaatctagtggagttgttatggctata
ccgatgcctggacatcccatctctagccaagaagaagagtctgttctcggtgattgcaaa
cgccttcgtgatttgattgagtctcatgatgcagtgttcttgttgactgatacaagagag
agcaggtggctaccttctcttctttgcgctaatgctaataagatcgctataaacgcggct
ttaggtttcgatagctacatggtaatgcgacatggcgctggccccacctcgttaactgat
gaaatgcagaatcttgacatgaacaagacaggaagacggagacttggttgttacttctgc
aacgatgttgttgcacctcaagattcaatgactgatcgaactcttgaccagcaatgcact
gttacacgcccgggactagctcctattgcaggagctctagccgttgaactcttagtagga
gtcctacaacacccactaggtatctatgcaaaaggagacaactcgagatcgagtagtgga
ggaaacaccgatgaatcacctctcgggatcttacctcatcagattcgaggctcggtttct
cagttctcacagatcacgctgctagggcaagcttccaacagctgtacagcttgttctgaa
accgtggtatcagagtatagagaaaaaggaaacagtttcatacttgaagctattaaccat
cctacatacctggaggatctcaccggtttaaccgagcttaagaaagctgctaattcgttt
agccttgattgggaagacgatgatgatgacgacgatgaagctgtagatatgtaa
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