Raphanus sativus (radish): 108805739
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Entry
108805739 CDS
T06014
Name
(RefSeq) zinc finger protein BALDIBIS isoform X1
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rsz03000
]
108805739
Transcription factors [BR:
rsz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
108805739
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_jaz
zf-met
zf-C2H2_STOP2_C
zf-C2H2_4
zf-BED
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
108805739
NCBI-ProteinID:
XP_018433175
UniProt:
A0A6J0JC27
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Position
6:41567972..41570224
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AA seq
452 aa
AA seq
DB search
MMIPDDHHHLSFPSYVLHQEPITANPSPNPNPTTSNSNKRKRNLPGNPDPDAEVIALSPN
SLMTTNRFICEICNKGFKRDQNLQLHRRGHNLPWKLKQRTDKEQVKKKVYVCPEKTCVHH
DPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVMSDWKAHSKICGTREYRCDCGTLF
SRKDSFITHRAFCDALAEESARFASVPPAAAACLNNASDAEVNLGNIKPNHQQRLPDRTS
SQHDQHGFNINHNNINGFTRQSSTNQLPLAANVFASSSSSPSPHSASALLQNLWELQGRQ
SYPQWLLNENNNNIIHSGMPNNQEDHDTKEGIFSNGSNLFSSEARTNYNQNGGQEMGSMS
ATALLQRATQMGSKRSSSSSNNGMAFGLMTSSIFNNKEMENNIKTKEVDERGFTRDFLGV
ASQNRPRPILMVNHNLPTTNDGTPTTDMNHKT
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgatgataccagatgatcatcatcacctctcattccccagctacgtccttcaccaagaa
cccatcaccgcgaatcctagccctaaccctaatcctaccacctcaaactcaaacaaaagg
aaaagaaatctcccgggtaatccagatccagatgcagaagtcatcgctctatcgccaaac
tcgctcatgacgacgaacagattcatatgcgagatctgcaacaaaggatttaagagagac
caaaaccttcagcttcaccggagaggccataaccttccatggaagctaaagcaaaggact
gacaaggagcaagtgaagaagaaagtctacgtttgtccggagaagacctgtgtacaccac
gacccttctcgagccctcggggacttaactgggatcaaaaagcatttcagcaggaaacat
ggagagaagaagtggaaatgcgagaaatgttccaaaaaatatgctgtcatgtcagattgg
aaagctcatagcaagatttgtggtaccagagagtacagatgtgactgcggtaccctcttt
tccagaaaagatagttttatcacgcatagagcattttgtgacgctttagccgaagaaagt
gctagattcgcctcagttccaccagccgcagctgcatgtttgaacaatgcctcggatgcg
gaagtcaatcttggaaacatcaaaccaaatcatcagcaacgactacctgatcgtacatct
tctcaacacgatcaacacggtttcaatatcaatcacaacaacattaatggcttcacgaga
caatcctccaccaaccagcttcctttagcagccaacgttttcgcatcatcatcatcatcg
ccatcacctcatagtgcatctgctttgcttcaaaatctatgggaattacaaggacgacaa
tcatatccgcagtggctactcaacgaaaacaacaacaacattatacatagtggaatgccc
aataatcaagaagatcatgacactaaggagggaatatttagtaatggttctaatttgttt
tcttcggaagcacgcaccaattacaaccaaaacggtggacaggaaatgggatcgatgtca
gccacggcattgctacagagggcgactcaaatgggatcaaagagatcatcatcaagctcc
aacaatggcatggcttttggtctaatgacttcatccatcttcaacaacaaagaaatggag
aataatatcaaaactaaggaagtcgatgaaagaggcttcacaagagactttcttggtgtg
gcaagtcaaaaccgtcctcggccaatattgatggtcaaccataatcttccaaccacaaac
gacggcacaccaaccaccgacatgaatcataaaacataa
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