KEGG   Raphanus sativus (radish): 108805854
Entry
108805854         CDS       T06014                                 
Name
(RefSeq) ABC transporter C family member 4
  KO
K05666  ATP-binding cassette, subfamily C (CFTR/MRP), member 2
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    108805854
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:rsz02000]
    108805854
Transporters [BR:rsz02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC1, 2, 3, 4, 5, 6, 10, 11, 12, 13 subgroups
    108805854
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N AAA_29 AAA_21 AAA_16 MMR_HSR1 RsgA_GTPase DUF87 AAA_23 FtsK_SpoIIIE Dynamin_N MeaB EP400_N nSTAND1
Other DBs
NCBI-GeneID: 108805854
NCBI-ProteinID: XP_018433328
UniProt: A0A6J0JCI5
LinkDB
Position
1:complement(21482984..21488665)
AA seq 1530 aa
MWWFSSSPSMWLSELSCSSSAVIESTSSLPVAIQWLRFVFLSPCPQRVLFSAVDLLFILV
LVFFALQKLFRSSSSSSSSTINGSVEVRKPLLQNRGRIIQTRTTAWFKTTVVSTVLLSFC
SVVLCVLAFTGKRRTQRPWNLVDPMFWLIHAVTNAVIAVLVLHEKRFASPSHPLSLRIYW
CSSFVVTTLFAVSGVLQLLSGGASLIAEDVASFFSFPLTVFLLTASVRGTTGVVVTNEES
NGNHNKPDDAVSEKSDNNNVSLYASASAFSKMFWLWMNPLLSKGYKSPLTLEEVPTLSPE
HKAERLALVFESNWPKPSENSSHPVRTTLIRCFWKEILFTAILAIVRLCVMYVGPVLIQS
FVDFTSGKRSSPLQGYYLVLVLLVAKFVEVLTTHQFNFNSQKLGMLIRSTLITALYKKGL
KLTSSARQNHGVGQIVNYMAVDAQQLSDMMLQLHAIWLMPLQVTLALVLLYGSLGASVVT
AIVGLTGVFVFILLGTKRNNRYQFSLMGNRDSRMKATNEMLNYMRVIKFQAWENHFNKRI
LNFRGMEFDWLSKFLYSIAGNIIVLWSTPVLISALTFATALFLGVKLDAGTVFTTTTIFK
ILQEPIRTFPQSMISLSQAMISLGRLDSYMMSKELSKEAVERSIGCDGRVAVEVRDGSFS
WDDEDNVPALKDINFKVNKGELTAIVGTVGSGKSSLLASVLGEMHRITGHVRVCGSTGYV
AQTSWIQNGTVQDNILFGLPMVREKYNEVLSVCCLEKDLQMMEFGDQTEIGERGINLSGG
QKQRIQLARAVYQDCDVYFLDDVFSAVDAHTGSDIFKKCVRGALKGKTVLLVTHQVDFLH
NVDCILVMREGKIVESGRYDELVSSGLDFGELVAAHETSMELVEAGAESSAATTVITSPR
PPTSPHPSSPRTSMDSPHLSDLNDEHVKSFLGSQTVEDGSKLIQEEQRETGQVSLGVYKQ
YCTEAYGWWGIIFVVFFSLTWQGSLMASDYWLAYETSSKNAVSFDASVFIRVYVIIALVS
IVLVSLRSYYVTHLGLKTAQIFFRQILNSILHAPMSFFDTTPSGRILSRASTDQTNVDIF
IPFMLGLVASMYTTLLSIFIITCQYAWPTIFFVIPLGWLNIWYRNYYLTSSRELTRLDSI
TKAPVIHHFSESIAGVMTIRSFRKHELFRQENVKRVNANLRMDFHNNGSNEWLGFRLELI
GSWVLCISALFMVMLPSNVIKPENVGLSLSYGLSLNSVLFWAIYMSCFVENKMVSVERIK
QFTDIPAEAEWVSKENSPPSNWPVHGNVHLEDLKVRYRPNTPLVLKGITLDIKGGEKVGV
VGRTGSGKSTLIQVLFRLVEPSGGKIVIDGIDICTLGLHDLRSRFGIIPQEPVLFEGTVR
SNIDPTDQYTDEEIWKSLERCQLKDVVATKPEKLDSLVVDSGENWSVGQRQLLCLGRVML
KRSRLLFLDEATASVDSQTDAVIQKIIREDFESCTIISIAHRIPTVMDCDRVLVIDAGKA
KEFDSPARLLEKQSIFAALVQEYALRSAGI
NT seq 4593 nt   +upstreamnt  +downstreamnt
atgtggtggttttcttcttctccttctatgtggctctccgagctctcatgttcttcgtca
gccgttatagaatccacatcttctcttccggtagcaatccaatggctgagatttgttttc
ctctccccatgccctcaacgtgttctcttctccgccgtagatcttctgttcatcctcgtc
ctcgtcttcttcgctcttcagaagctctttcgctcatcttcttcctcttcttcttccact
atcaacggaagtgtcgaggttaggaaacctcttctccaaaaccgtggaagaataatccaa
acaagaacaaccgcatggttcaaaaccactgtcgtatccaccgttttattgtcgttttgc
tccgttgtgctctgtgtgttggcgttcacggggaagagacggactcagagaccatggaac
ctcgtagacccgatgttctggctaatccacgccgtcacaaacgccgtcatcgcagttctc
gtcctccacgagaagagattcgcatcgccgagccatcccttgtcgctaagaatctactgg
tgttcaagcttcgtcgtcacaacactcttcgccgtctccggggtcctccaattactctcc
ggcggtgcaagcttgatagccgaagacgtcgcttcgttcttctccttccccttaaccgtc
tttctgctcaccgcttccgtcagagggaccacaggcgttgttgtcacaaatgaagagagc
aacggtaatcataataaaccagacgacgccgtttcggagaaatctgacaataacaacgtc
tctctttacgcatccgcttcggctttctcaaagatgttttggttatggatgaatccttta
ctcagcaaaggctacaaatcaccgttgactctcgaagaagtccccacgctctctccagaa
cacaaagcagagaggctcgcgctcgtcttcgaatccaactggcctaaaccgtctgaaaac
tcgagccatcctgtccgtaccacactaataagatgtttctggaaagagatcctttttacc
gccatcttagcgatcgtacgtctttgcgtcatgtacgttggtcccgttctcatccagagc
ttcgtcgacttcacctcaggcaagagatcatcgcctttgcaagggtactacctcgtcctc
gtcctcctcgtcgccaagttcgtcgaggtcttgacgacgcatcagtttaacttcaactct
cagaagctcgggatgcttatacgctccactctcatcactgcattgtacaagaaaggttta
aagctcactagctccgcgcgtcagaaccacggcgtcggtcaaatcgtgaactacatggct
gtcgatgcacagcagctctctgacatgatgcttcagctccacgcaatctggcttatgccc
ttacaagtgactctcgcgttagtgcttctctacggaagcctaggcgcgtctgttgtcacg
gccatcgttggcctcactggtgtgtttgtattcatcctcctagggactaagagaaacaac
aggtaccagttcagcttgatgggaaacagagattctcgtatgaaagccaccaacgagatg
cttaactatatgcgtgtgatcaagttccaggcttgggagaatcatttcaacaagaggatc
ctcaacttcaggggaatggagtttgattggctctctaagtttctttattcgatagccgga
aacatcattgttctctggagcacaccggtgctcatctctgctctcacgttcgccaccgcg
cttttcttgggagtcaagctagacgctgggaccgtgttcaccaccaccaccattttcaag
atcttgcaagaacctatcaggacgtttcctcagtctatgatatctctctcgcaggcgatg
atctctcttggaaggctcgactcgtacatgatgagcaaagagctgtctaaagaggccgtg
gagagatccatagggtgtgatggtcgtgtcgccgtggaggttagagatggaagtttcagt
tgggatgatgaggacaacgtacccgcgcttaaagacatcaacttcaaggttaacaaagga
gagctcactgcgatagttggaaccgttggttcgggaaaatcttcgctgttagcttcggtt
cttggcgaaatgcacaggatcacaggacatgtgagagtttgtgggagcacaggttacgta
gcgcagacatcgtggatccagaacgggacggttcaagacaacatcttgtttggtcttccg
atggttagagagaagtacaacgaagttctcagtgtctgttgtcttgagaaagatctgcaa
atgatggagtttggggatcaaactgagattggtgaacggggaatcaacctcagcggaggg
cagaagcagcgtatacagctcgcacgtgcggtttatcaggattgcgatgtgtactttctt
gatgatgttttcagcgcagtggatgctcatacaggttcagacatattcaagaaatgtgta
cgaggagctctgaaaggcaagacagtcttgctagtaacacatcaagtggacttcttacac
aacgttgattgcattttggtgatgagagaagggaagattgtagaatcaggaagatatgat
gaattagtcagctccggtttggattttggggaacttgttgccgcacatgagacatctatg
gagctagttgaagccggtgcagagtcttcagcagcaacaacagtcattacatcgccaaga
ccaccaacgtctccccatccaagctcaccaagaacgtccatggattctcctcacttaagt
gatctcaacgatgaacacgtcaagtcgtttctcggctctcagaccgtagaagatggctca
aaactcattcaagaagagcaaagggagaccgggcaggttagcctgggagtttacaaacag
tattgcaccgaggcatatggctggtggggaatcatctttgtggtgttcttctctctaacg
tggcagggctcactgatggctagcgattactggctcgcatacgaaacatcatccaagaat
gctgtttcgtttgacgcctctgtttttattcgtgtctacgtcattattgctcttgtttcc
atcgttttggtgagcttacgctcatattacgtcacccacttgggactcaagaccgctcag
atcttcttccgacagattcttaacagtatcttacatgctcccatgtcgttcttcgacacc
acaccatctggaagaatcctcagtcgggcatcgactgatcagaccaatgtcgatatcttc
ataccgttcatgcttggacttgtggcctcaatgtacactactctgctgagcattttcata
attacttgtcagtacgcttggccaactatattctttgtgatacctcttggatggctcaac
atctggtaccggaactattacctcacatcttcccgtgaactgacgcgcctagactcgata
actaaggctcctgtcatccaccatttctcggaaagtatagctggagtgatgacaatcaga
tcattcaggaaacatgagttgtttaggcaagagaacgtgaagcgtgttaacgccaatctt
aggatggacttccacaacaatggttcaaacgagtggcttgggtttcgtctagagcttatt
gggagctgggtgctctgcatctcggctctgtttatggtaatgttaccaagcaacgtaatc
aaaccagaaaatgtcggcttgtctctttcttatggattgtctttgaactcggttctgttt
tgggcaatatatatgagctgctttgtcgagaacaagatggtttccgttgaaaggatcaaa
cagttcactgatattcctgctgaagctgagtgggtgagcaaagaaaactccccaccttct
aactggcccgtccatggcaatgtacatctcgaagacctcaaggtacggtacagaccaaac
actccacttgtgctcaaaggaatcactctggacatcaaaggaggagagaaagtcggtgtg
gttggacgaacaggaagcgggaaatctacgttgatccaagtcttgttcaggcttgtagaa
ccatcaggtggaaagatagtcatcgatgggatcgatatatgcactctagggttacatgat
ctcaggtcaagattcggaatcattccacaagaaccagtcctctttgaaggaaccgtaagg
agcaacatcgacccaacagatcaatacactgatgaagaaatctggaagagcctcgaacga
tgccaactcaaggatgttgttgccacaaaacctgagaagctcgattcgttggtggttgat
agtggagagaactggagcgtaggacaaagacagcttctgtgtttaggcagggttatgttg
aaacgaagcagacttctattcctagacgaagcgacagcatctgtagattcacaaaccgat
gccgtgattcagaagattatcagagaagactttgagtcatgtactataatcagcatagct
cacaggattccaacggtgatggactgtgatcgagtcttggtcatagacgcaggtaaagca
aaagagtttgatagcccggctcgtttgcttgagaagcagtctatatttgcggcgctggtg
caagaatacgctctcagatctgctggaatatga

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