KEGG   Raphanus sativus (radish): 108805862
Entry
108805862         CDS       T06014                                 
Name
(RefSeq) putative lysine-specific demethylase JMJ16
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
rsz  Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:rsz01009]
    108805862
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:rsz03036]
    108805862
Enzymes [BR:rsz01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     108805862
Protein phosphatases and associated proteins [BR:rsz01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     108805862
Chromosome and associated proteins [BR:rsz03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    108805862
SSDB
Motif
Pfam: JmjC FYRC JmjN zf-C5HC2 FYRN KDM5_C-hel
Other DBs
NCBI-GeneID: 108805862
NCBI-ProteinID: XP_018433339
UniProt: A0A6J0JEN5
LinkDB
Position
1:complement(3139841..3145673)
AA seq 1194 aa
MGTELMRVCMKEESDELPSVPPGFESYATLTLKRVLPGGGAAATDKTMESVSPVTEQAKK
METESDELKAARSLRRRPWINYAGCDDDSTAPNNDNAYSQNLNQNCTPNTSLPKGVTRGC
AECNDCQKVTARWHPDEARRPELEDAPIFYPSEEEFEDTLNYIAKIRPEAEKYGICRIVP
PPSWKPPCPLREKQVWEGSKFTTRVQRVDKLQNRSSMKKITNQMRRKKRKCMKTGVDAVT
TNGNPGSASTEMSQLFETFGFEPGPGFTLNDFKKYADEFKTQYFKKSETSSSDNVCKVGN
SIDCLEPTVEDVEGEYWRIVDKATEEIEVLYGADLETGVFGSGFPKISTSQEASSSSSDE
KYAKSGWNLNNFSRLPGSLLKHEGSDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMH
WGEPKLWYGVAGKDAIKLEEAMRKHLPDLFEEQPDLLHKLVTQLSPSKLKTAGVPVHRCV
QHAGEFVLTLPRAYHAGFNCGFNCAEAVNVAPVDWLPHGQIAIELYCQQGRKTSISHDKL
LLGAAREVVKADWELNLLKKNTLDNLRWKQFSGKDGILAKTLKARIDIERTRREFLCSSS
LALKMHSNFDATNERECCICFFDLHLSAAGCRCSPEKYTCLTHVKQLCSCPWVSKYFLFR
YDIDELSVLVEAVEGKLSAVYRWARQDLGLALSAHVSGSKMEMDEEVGKVHKDLSPQAAA
VVGLDVNLLLKDKEKVLPSHCMKPVKEETVNESSVPKALVCQQSEGGMLSVAAAKSSGKK
NSQNVPSDVILLSDDNKHDMHRKRGSVSSGNKQLKIRERPTHVLALEAISKIPAPNLEKQ
GKSLPDTRNTTISSSLPANNDQRAVGEDVPSCSVSHVQVNAVADGSARDICNRVDTSNHG
GEKPTSSSKSKISGGLVVVDGTKSKTSTPSCSQNNGTRSKSSTPTCSQNNSPDRIIRQKG
PRIAKVVRRVKCKVEPLSYGCVLSGKSWCNRQAIFPKGFRSRVRYINIVDPTNMCFYISE
ILDTGRNSPLFMVYLEANPSEVFAHLSPTRCWEMVRERVNQEISKQHKAGKLDLPPLQPS
GSPDGFEMFGYTSPAIIQAIEALDVNRVCTEYWDSRPYSRPQVQFPANTSIQSSSDVRNL
QKAPGQLAAGTNSTLKVLLKRANVEELSSLQQVLSESNIDLVTELVKEELQNRS
NT seq 3585 nt   +upstreamnt  +downstreamnt
atggggacagagctaatgagagtctgtatgaaagaagagagtgatgagttaccatctgtt
cctcctggctttgaatcatatgctactctcaccctaaaaagagtactccctggtggtggt
gctgctgctactgataaaaccatggaaagtgtttctcctgtaaccgaacaagctaagaag
atggagactgaatccgatgaactcaaagctgctcggtctctaaggcgtagaccttggatt
aactatgccggatgtgatgatgattctactgcaccaaacaatgacaatgcatattctcag
aatcttaatcaaaattgtactccgaatacttctcttccaaagggtgtgacccggggatgt
gcagaatgtaatgactgccaaaaggtaaccgcgagatggcatccagatgaagctcgtaga
cccgagcttgaagacgcccctatattctaccccagtgaagaggagtttgaagacactctg
aattatattgctaaaataagaccagaggctgaaaagtatggaatctgtcgcattgttcct
cctccttcctggaaacccccttgccctctgagagaaaagcaagtatgggaaggttctaaa
ttcaccacacgtgtccaaagagttgataagcttcagaatcggagttcaatgaagaagatt
actaatcagatgagaaggaagaaaagaaagtgcatgaaaacgggagtggatgctgtcact
actaatggcaatcccggttctgcaagcacggagatgagtcagctttttgagacgtttggg
tttgaacctggtccagggttcactctaaatgacttcaaaaagtatgctgatgagttcaag
actcagtactttaaaaagagtgaaacttcttcttctgacaatgtatgcaaagttggtaac
tccatagactgcttggagccaacagttgaggatgttgaaggtgaatattggcgtatagta
gataaagcaactgaagagatagaggtgctatatggtgccgacctagaaaccggggtattt
ggcagcggattccccaagatatcaactagtcaggaggcttcttcttcttcttcagacgaa
aaatatgcaaaatctggctggaacctaaataatttttcaaggcttccagggtccctgctt
aagcacgagggcagcgatatttcaggtgtccttgtaccctggttgtatattgggatgtgc
ttttcttccttctgctggcatgttgaagatcaccacttgtattcgttaaactatatgcat
tggggtgaaccaaagctgtggtatggtgttgccgggaaggacgctattaaactcgaggag
gcgatgagaaagcatttgcctgaccttttcgaagaacaacctgatctgcttcataagcta
gtaacacaactctccccgtcaaaactgaaaacggcaggagtacctgtgcaccgctgcgtc
cagcatgctggagagtttgtcttgactcttcctcgggcatatcacgctggatttaactgt
ggtttcaactgtgcggaagctgtgaatgtagcaccggttgactggttgcctcatgggcag
attgccatagagttatactgtcaacagggtagaaaaacgtcaatctcacatgataaactg
ttgcttggggcagcaagagaagtagtgaaagccgactgggagctgaacttactgaagaaa
aatactttagataacctgaggtggaaacagttcagcggaaaggatggaatcttggcaaaa
acactcaaggcacgcatagacatagaacgtacaagaagagagtttctgtgcagttcctcg
cttgcgttgaagatgcatagtaattttgatgctaccaacgagagagagtgctgtatatgt
ttctttgacctgcacctgtccgctgctggttgccgttgttccccagagaagtatacatgt
ttgactcatgtgaagcagttgtgttcgtgtccgtgggttagtaaatattttctgtttcgc
tatgatatcgatgaactgagtgttcttgttgaggctgtggaaggaaaacttagtgctgtg
tatagatgggcgcgtcaagatttaggattggctttgagtgcacacgtctcaggaagcaag
atggagatggatgaagaagtagggaaagtgcacaaagacctgagtccacaggcagctgca
gttgtagggttagatgttaatttacttctgaaagacaaggagaaagtattaccaagccac
tgtatgaagcctgtcaaagaagaaactgttaatgagtcctctgttccaaaagctttagtt
tgccaacaatctgaaggaggcatgctctctgtggcagctgctaagtccagtggtaaaaag
aattcacagaatgtacctagtgatgtgattctcctcagtgatgataataagcatgacatg
cataggaaacgaggttcagtatcttctggcaacaagcagttgaaaatacgagagagacca
acccacgttttagcgttagaagcaattagtaaaatccctgctccaaatttagaaaagcaa
ggaaagtctttgcctgatacacgaaacactactatatcatcatcattgcctgctaataat
gaccaaagagcagtgggagaggatgtaccgagttgttctgtatcgcatgttcaagttaat
gccgtagctgatgggtctgctcgtgatatatgtaatagagtggacacaagcaaccacggt
ggtgaaaaacctactagtagcagtaaatccaaaatctctggaggtttggttgtggttgat
gggacaaaaagcaaaacaagtacaccatcttgttcgcaaaataacgggacaagaagtaag
tcaagtacaccaacttgttcgcaaaacaatagtccggataggatcatccgccaaaagggt
ccacgtatagcaaaagttgtgaggagagtcaaatgcaaagtagagcctttaagctatgga
tgtgtgctctctggaaaatcatggtgcaaccgccaagcaatttttcccaaaggttttcgt
agcagggttaggtacatcaatatcgtggatccaacaaacatgtgcttctacatttcagag
attctggatactggacgcaatagtccgttgttcatggtttacttggaggctaatccgagt
gaggtgtttgcgcacttgtcgcctacaagatgctgggagatggtaagagaaagagtaaac
caagagataagtaagcaacacaaagctggtaaattagatcttcctcctctgcagccttct
gggagtcctgacggttttgaaatgtttggatacacgtcacccgccatcatacaggctatc
gaagcattagacgtgaatcgagtttgcacagagtattgggattcaaggccttattcgagg
ccacaagttcagttcccagccaacacaagcatccaatcatcatcggatgtgagaaatctc
cagaaagcccccggtcaattggctgctggaacaaactctactctcaaagttctgctgaag
agagctaacgtggaggaactcagctcacttcaacaggttttaagtgagtctaacatagat
ttggtaaccgaacttgtgaaggaagagctccagaatcgtagctga

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