Raphanus sativus (radish): 108806015
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Entry
108806015 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108806015
KO
K15443
tRNA (guanine-N(7)-)-methyltransferase subunit TRM82
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rsz03016
]
108806015
Transfer RNA biogenesis [BR:
rsz03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
108806015
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
WD40_CDC20-Fz
EIF3I
Beta-prop_TEP1_2nd
WDR55
WDR90_beta-prop_4th
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_DCAF12
Ge1_WD40
Beta-prop_HPS5
WD40_RFWD3
Vps16_N
Motif
Other DBs
NCBI-GeneID:
108806015
NCBI-ProteinID:
XP_018433531
UniProt:
A0A6J0JET6
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Position
1:1597452..1600242
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AA seq
425 aa
AA seq
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MEESHIEEGESQNKLLEVAPALISVHPSQESVAVTVGSDLRVFDLIENQPVTLVDESDGS
PHKDSVRAISYGASGKLFVSAGDDKLVKIWSAESWRCLNTISSEKRVSAVAISGNDSHVC
YADKFGVVWVVELDGISEGHQVLPSKKGAPLLSHYCSIITSLEFSPDGRYILSADRDFKI
RVTVFPKEPLQGAHEIQSFCLGHTEFVTCIAFVCNPELAQGYLMSGSGDSTVRLWDITSG
SLLDTCEVSTMAGQIESNESEPVQVTVTDICAIPNTCSAAVSIQSFQGILLLSCDLSAHS
LSLTKVVKIPGESFIPTSISLSTSTRLLWMVSGASNGSNHPGYSRVRVISCIEAEPSSVL
EDEQIPGGTKLLEKLQGKVSIEESVMSAAAEAVRAAMSSLLMKKQYSDEKREFRKRTRND
KKTTN
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatctcacatcgaagaaggagaaagccagaacaaactactcgaggttgctcct
gcactaatatccgttcacccatctcaggaatccgtagctgtcaccgtcggttcggatctt
cgtgtattcgatcttatagagaatcagccagttactttggtggatgaatctgatggatct
ccccataaggattccgttagagctattagctatggtgcgagtggaaagctcttcgtgtct
gcaggcgatgacaagctggtcaagatttggtctgcagagtcttggcgttgccttaacact
atatcttctgagaagagagttagtgcggttgctataagcggcaatgattcgcatgtttgc
tatgcggacaagttcggtgttgtatgggttgtcgagttagatgggatcagtgagggtcat
caagttttgcctagtaagaagggtgcgccgctgctttctcattattgtagtattattact
agcttggagttttccccagatggtcgatatattcttagtgctgatcgggactttaagata
agagtgactgtttttcctaaggagcctctacaaggggctcatgaaatacagagcttttgt
cttggacatacagagtttgttacctgcatagcctttgtctgtaatccagagcttgctcaa
gggtatctcatgtctggaagtggagattcaacagttcggttgtgggatattacatccggg
tctcttctcgacacatgtgaagttagtaccatggcaggacaaatagagtctaatgaaagt
gagccggtgcaagtcacagtgactgatatatgcgctatcccgaatacttgttctgcagct
gtgtctattcaaagttttcaaggaatattattgttaagctgtgatttatcagctcattct
ctctccctcacaaaggtagttaaaatccctggagaaagtttcatccccactagtatttct
ttaagcacatctacaaggttactatggatggtgtcaggagcctctaatggctcgaaccat
cctggttattcgagggttcgtgtcatctcgtgcattgaggctgaaccatcttcagtcctc
gaagatgagcagattcccggagggacgaaactgttggagaaattgcaaggtaaagtttca
atagaagagagtgtgatgagcgctgcagcagaagctgtgagagcagcaatgtccagcctt
ttgatgaagaagcaatactctgacgagaagagagagttcaggaaaagaaccagaaatgat
aagaagaccacaaactga
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