Raphanus sativus (radish): 108806068
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Entry
108806068 CDS
T06014
Name
(RefSeq) farnesyl pyrophosphate synthase 2
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz00900
Terpenoid backbone biosynthesis
rsz01100
Metabolic pathways
rsz01110
Biosynthesis of secondary metabolites
Module
rsz_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
108806068
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rsz01006
]
108806068
Enzymes [BR:
rsz01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
108806068
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
108806068
Prenyltransferases [BR:
rsz01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
108806068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Pfc11_Rna14-15-ID
Motif
Other DBs
NCBI-GeneID:
108806068
NCBI-ProteinID:
XP_018433596
UniProt:
A0A6J0JF01
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All DBs
Position
6:complement(19582346..19584572)
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AA seq
383 aa
AA seq
DB search
MSLSGCCRNLRITIKALLHLHLRRSSLYHRTQSRHLSSSSSMADLKSTFLNVYSTLKSDL
LHDPSFEFTDESRLWVEKMLDYNVPGGKLNRGLSVVDSFKLLKEGEDLTEEEVFLSCALG
WCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPQVGMVAINDGILLRNHIHRILKKHFRG
KPYYVDLVDLFNEVEMQTACGQMIDLITTFEGEKDLAKYSLPIHRRIVQYKTAYYSFYLP
VACALLMAGENLENHIDVKNVLVDMGIYFQVQDDYLDCFADPETLGKIGTDIEDFKCSWL
VVKALERCSKEQTEILYENYGKPDPSNVAKVKELYKELDLEGVFKEYESKSYEKLTGVIE
AHKSKAIQAVLKSFLAKIYKRQK
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgagtggttgttgtaggaatctgagaatcacaataaaggctcttctgcattta
catctcaggcgatccagtctctatcatcgtacccaaagtaggcacctttcatcctcctct
tcaatggccgatctcaagtcaaccttcctcaacgtctactccaccctcaaatccgacctc
ctccacgacccttccttcgaattcaccgatgaatcacgtctctgggtcgaaaagatgttg
gattacaatgtaccgggagggaagctgaatcgtggtctctctgtcgtggacagcttcaag
cttttgaaggaaggtgaagatttgaccgaggaagaggttttcctctcgtgtgctcttggt
tggtgcatcgaatggcttcaagcttatttccttgtgcttgatgacattatggataactct
gtcactcgacgtggacaaccttgctggttcagagttcctcaggttggtatggttgcaatc
aacgatgggatcttacttcgcaatcacatccacaggatcctcaagaagcacttcagggga
aagccttactatgttgacctcgttgatctctttaatgaggtagagatgcaaacagcttgc
ggccagatgattgatctgatcaccaccttcgaaggcgaaaaggatttggccaagtactca
ttgccaatccaccggcgtattgtccaatacaaaactgcttattactcattttatctccct
gttgcttgtgcgttacttatggcgggcgaaaacttggaaaaccatattgatgtgaagaat
gttcttgttgacatggggatctacttccaagtgcaggatgattatctggattgttttgct
gacccagagacacttggcaagataggaacggatatagaagacttcaaatgctcctggttg
gtggtaaaggcattggaacgctgcagcaaagaacaaactgagatattatatgagaactac
ggtaaacccgacccatcaaacgttgctaaagtgaaggagctttacaaagagcttgacctt
gagggagtgttcaaggagtatgagagcaaaagctacgagaagctgactggagtgattgag
gctcacaaaagtaaagcaatccaagcagtgctcaaatccttcttggctaagatctacaag
aggcagaagtag
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