Raphanus sativus (radish): 108806195
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Entry
108806195 CDS
T06014
Name
(RefSeq) uncharacterized protein LOC108806195
KO
K10895
fanconi anemia group I protein
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
108806195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rsz03400
]
108806195
DNA repair and recombination proteins [BR:
rsz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
108806195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FANCI_S4
FANCI_HD2
FANCI_S2
FANCI_HD1
FANCI_S1
Motif
Other DBs
NCBI-GeneID:
108806195
NCBI-ProteinID:
XP_018433745
UniProt:
A0A6J0JDR4
LinkDB
All DBs
Position
6:15874214..15880434
Genome browser
AA seq
1444 aa
AA seq
DB search
MTVAAEEPSHHPQKPLTDNDIIRLAQYHHCQTSLSLPPYLLSPTSHDPLLSYLKSRSSLP
SPSKPVSEYAIALLSLISLSPTAPSLSSLLASLLVAYARIFPEIPSDSDSLKTIQLFGAL
IRYLHVEEIKSVVDSILSGVSRVVTVDDAQLFDLLPVCFDLLRNPIEAKASEIDYVDSAV
DRVLSCEWEKGFLTKIVSLAKEFQFLDKGRKSELLEKVFLGVKFVDLQDLPSLVYQLLVL
ASKGFCKREVIGGVVCFFGSRSESRVASVLRQIEGTVLLHVNFAVKQDPSLGQEVVALVK
SDLRAFNHFTVAVLFSVARVRKFGENSLGVLRTALLSAYNDYRLSKDCKWLPDELKEESL
LHAKLVEKSLLRAVSECKYGREHVFPSVIQFGFMLLESVEEGRSNEFSGSSGVLGIEKLS
IQILGTLFEVHDMTRNEIIEQCKFRILSLKCAKSKPILRLLGYLVQRYSLIMLEYVHHLK
ELLDYFTFMEGNISCFLVSAVIPLIKFSRDLQDYTILVIRKAMFRREDTVRVSATKVIIE
LILAEKQAKKDSSFTLQDSSSQASSSQHTEVSCTVRGNLFTELNGLLQRCLYQQAKVKEV
VYDGLVKLVLIDPSSGVHVLDFLMPHFLRFFRQDIDFQLGITSCIKVEGAKFIIEEPLER
LLFCISWILLLQPHSSSDRPSDIAWPCFGFSLTQENEQAGRNVSHEVYSSTLLKVRNFLL
GKKLGDIVGLSQDTVSASLEEDKRKSYCLIILGIVQVLLNYIITDLDKQPEGKKVEIEKD
IFDLVDLYESLENEVGKSKQGNIGKRVRFSSRNKSDDTDVGFASINEEREQVPFLATSSI
HQLFLIAFKLHSSKSTGNLSGLQDHSQSSSAKTEKSISTVFSFTLQVCVGHIRSSLRMKE
GNPLKPLVYGDMTVLGSPLLKVIYLLGPPLLTGQASKEKKGRKDAEGRKHCLHLALLSLK
ELLSIYSSGSVLTGLLEDLIAVPASEDAILEECCEASNIEDPLVKNIEIFIEKVMKPIIT
DLIAQNSNDVEILCDIMLMLGNTLPDKFKQLHGSWAHQIFRSCETSNTTVAKSILKLAIS
FTTSPGDLCIAVEVAKELQNVIGLDKSDTSQVSESYTIINQSTSASITSCILQLVDSAIG
DMDWGTKKLKNLYVASQKNIHVNRDDESTFVLALEEALYAMAESTVRILSSFVLMNLKDS
QAAQFLRLAVKFYKQLAQIVKQRIAPKGCKQTLPSLKFQKLVELTCKSLTAPLYPFLAEL
QKEQQESMSSNSKGIINKIKQENKCIPDLIFQIEDYERYLIQLSKVTKLNLLRHAKRSTA
RDFKIIEDTEAPSGGQDEENQAETERQNNNIGGNEDGLGEESEDDSEKVVSPRDASLGSS
RDLDADTAIAAEENDEEEEEKEEGDEEEEEEGDEEEEGSGFSRSKKIAKKSLVVEDSDED
SVTF
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcgccgccgaagaaccgtcacaccatcctcagaagcctctcaccgataacgac
atcatccgtctagcccagtaccaccactgccaaaccagcctctccctccctccctacctc
ctctctcccacctcacacgatcccctcctctcctacctcaaatcccgctcgtctctacct
tccccgtcgaagcctgtctccgagtacgcgatcgctctcctctcgctaatctccctgtcc
ccgaccgctccgtcgctctcctccctcctcgcatctctcctcgtcgcctacgctcggatc
ttccccgaaatcccgagcgattcggattccctcaagacgattcagctcttcggagctctg
attcggtacttgcacgtcgaggagatcaaatccgtagtcgattcgatcttatccggtgtg
tctagggttgtaaccgtcgatgacgctcagctgtttgatctattgcctgtgtgctttgat
ttattgcgtaatcctatagaagctaaggctagtgagatagattacgttgattccgcggtt
gatcgtgttcttagctgtgaatgggagaaaggatttctgactaagattgtatctcttgct
aaggagtttcagtttcttgataaggggagaaagagcgagttgctggagaaagtgttttta
ggtgttaagtttgtagacttgcaggacttgccttcacttgtgtatcagttgcttgttctc
gcttcgaaaggtttttgcaagagggaggtgatcggaggagttgtttgcttttttgggtct
agatccgagagtagagtggcgtctgtgcttaggcagatcgaggggactgttcttcttcat
gtgaatttcgcggtgaagcaggatccttcactggggcaggaggttgtggcgttggtcaag
tctgatctcagggcttttaatcattttacggtcgcggttcttttttcggttgctagggtt
agaaagttcggtgagaactcgttgggggtgttgaggacggctttgcttagtgcgtacaac
gattacagactctccaaagattgcaagtggctacctgatgagctgaaggaagagagttta
ctgcatgccaaattggttgaaaaatctttgctaagagcggttagtgagtgcaaatatggg
agggagcatgtgtttccgagtgttattcagtttggctttatgttgctagaatctgttgaa
gaaggtagatccaacgagtttagtggttccagtggcgtactgggtattgagaagcttagc
attcagattctgggaaccctatttgaagtccatgatatgacaagaaacgagataattgag
caatgcaagtttcgcattctttctttgaaatgcgcaaagagcaaaccaatattaaggttg
ttagggtatcttgtccagagatattcacttatcatgttggaatatgtccatcatctcaaa
gaattattggattatttcactttcatggagggaaatatcagctgttttctcgtgtctgct
gttatcccgctcatcaaattcagccgtgatctgcaggattataccatcttggtgatccga
aaggctatgtttagacgggaagatacagttcgtgtatcagcgacaaaggtaataattgaa
cttatacttgccgagaaacaagctaagaaagacagctcatttactctccaagactcatca
agccaagccagttctagtcagcacactgaagtgagctgcactgtgaggggaaacctcttt
actgaactgaatgggttgcttcaaagatgtctttaccaacaggcaaaggtgaaagaagta
gtttatgatgggcttgtaaagttagtcctgattgatccatcaagtggagtacatgtattg
gactttcttatgcctcactttcttcgtttcttcagacaggacatagattttcagcttgga
atcacttcatgcattaaagtagaaggtgccaaatttattattgaagagcccttggaaagg
cttctcttttgtatctcttggattttactcctccagccgcacagtagctctgatcggcct
tctgatatcgcctggccatgttttggtttctcacttactcaagaaaatgagcaggcagga
agaaatgtatcgcatgaagtgtactctagtactttgctgaaggtccgaaactttctacta
ggcaaaaaattaggagatattgttgggctgtctcaggacacagtttccgcatctctagaa
gaagataaaagaaaatcctattgtctgattattttggggatcgttcaagtgctgctaaat
tatataataacggatctagataaacagccagaagggaagaaagttgaaattgagaaagat
atttttgatttggttgatctttatgaatcactggaaaatgaggtggggaaatcgaaacaa
ggcaatattggcaagagagtacgattcagctctcgtaataaatctgatgacactgatgtg
ggattcgcaagcatcaatgaagagcgagaacaagttccctttttggctacttcaagtatc
caccagctatttctaatcgccttcaaactccatagcagcaaatccactggtaatctttca
ggtttgcaggatcacagccagtcatcatcagccaagacagaaaagtcaatttctacagtt
ttctcttttaccttgcaagtttgtgttggacacataagatcatctcttcgcatgaaggag
ggaaatccacttaaaccgttggtctatggtgacatgacagttctgggctctccactgcta
aaagtaatttacctgctaggaccacctttactaaccggacaagcgagtaaggagaagaaa
ggaaggaaagatgctgaaggaagaaaacactgtctacatctggccttgcttagtttgaaa
gagctgctcagtatatattcaagtggatctgtcttgactggcttgcttgaggatttgata
gcagtgcctgcatccgaagatgctattttagaagagtgctgcgaagcttcaaatattgaa
gatccacttgtaaagaacatcgaaattttcattgaaaaagtcatgaagcccattatcaca
gaccttatcgcccaaaactctaacgatgtagagattctatgtgacataatgttgatgctt
gggaacactctacctgacaaattcaaacaactgcatggatcatgggctcatcagatcttc
agaagctgcgaaacatctaacaccaccgttgcaaagagcattttaaaactcgccatctct
tttaccacatctcctggtgatctatgcatagccgtggaagtggctaaggagttgcaaaac
gtcatcggtttagacaaatccgatacttcgcaggtgtctgaatcatacacgatcataaac
cagtcaacaagtgcttcaataacttcttgcatattgcaattagttgattcagcaataggt
gacatggattggggcacaaagaagctaaagaatttgtatgtggcctctcagaagaacatc
catgtcaaccgtgatgatgagagtacatttgtgctggctctcgaagaagctctttacgca
atggctgagtcaacagtcaggatactctcttcctttgttttgatgaacctcaaagactca
caagcagcacagtttctaagactggcagttaagttttacaaacaattagcacagattgtg
aaacagaggattgctcctaagggttgcaagcaaactcttcccagccttaagtttcaaaaa
ctcgtggaactaacttgcaagagtctaacggctcctttgtatccctttttagctgaattg
caaaaggaacaacaggaaagtatgagttccaattccaagggtataatcaacaagatcaaa
caggagaacaaatgcatccctgatttgatattccagattgaagactatgaaagatacctt
atccagctaagcaaagttactaaactcaatttgttgaggcatgccaagcgcagcactgcc
agagacttcaaaataattgaagatacagaagctccttcaggaggccaagatgaagaaaac
caagcagagacagagagacagaacaacaatattgggggtaatgaggatggtttgggagaa
gagtcagaagatgattcagagaaagtcgtgtcccctcgtgatgctagtttgggatcatca
cgggacttagatgctgatacagcgatagcagcagaagagaacgatgaagaagaagaagaa
aaagaagaaggagatgaagaagaagaagaagaaggagatgaagaagaagaaggaagtggt
tttagtcgatctaagaagatagcaaagaagagtttggtcgtggaagattccgatgaagat
tctgtaacgttttag
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integrated database retrieval system
