Raphanus sativus (radish): 108806250
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Entry
108806250 CDS
T06014
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
108806250
Enzymes [BR:
rsz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
108806250
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
PhoLip_ATPase_N
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
108806250
NCBI-ProteinID:
XP_018433816
UniProt:
A0A6J0JFL5
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Position
8:complement(1543016..1546542)
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AA seq
695 aa
AA seq
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MFLFSSHVLHLVTTTGHQRQLLRQRGWMIALIMFLSLFEIAISQNQSCDPESTQVLQLLY
QDGHVVIDNGIFQLTLSNPEGFVTGVKYNGIENVLAYTGHENDRGYWDLVWNFPGKKTKK
TKGTLDRIEATKMEVITQNDEQIEISFSRTWNASSNVTVPVNIDKRFVVLLNSSGFYSYA
IFERLQGWPAVEIDNIRLAIKLDKDKFDYMAISDERQRYMPLPDDRIPPRGKPLAYPEAV
QLLDPIEPEFKGEVDDKYEYSMESKDIKVHGWISTNDSVGFWQITPSNEFRSAGPLKQFL
GSHVGPTNLAIFHSTHYVGAELIMSFEEGEAWKKVFGPVFIYLNSFPKEVDPLLLWHEAK
NQTKIEEEKWPYNFTTSSDFPASDQRGSFTGRLLVRDRYISSEEIPANGSYVGLASPGDV
GSWQREYKGYQFWSKADEEGYFCINNVRSGRYNLYAFVPGFIGDYHNDTVFDVSPGSNIC
LGELVYEPPRDGPTLWEIGVPDRTAAEFYIPDPNPMFVNKLYVNSSDNKYRQYGLWERYS
ELYPDEDMVYDVDVDDYSKDWFYMQVTRKRDDGGYNGTTWEIKFEFDDQVTNLTGDFKLR
IALATSNVAELQVRVKDVSVDPPLFTTGQIGKDNTIARHGIHGLYWLYSVNVPASSLGLG
CNSIYLTQPLAISPFQGLMYDYIRLEYPDSVYHIT
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgttctcttcacatgttttacatctcgtgactaccacaggtcaccagagacaa
ttattgagacaaagaggatggatgattgctttgatcatgttcttgtctttgtttgagatt
gctatctctcagaaccaaagttgtgacccagaatcaacacaagtcttgcaattactttac
caagatgggcatgtggtaattgataacggaattttccaattaactttgtcaaatcctgag
ggatttgtgactggagttaagtacaatggtatcgaaaatgtgcttgcctataccggccat
gaaaatgatagaggttactgggacttagtgtggaactttccaggaaagaaaactaaaaag
accaaaggcacattagaccggattgaagcgacaaagatggaagtgataacgcagaacgat
gaacagatagagatatcgttttcaaggacatggaatgcttcttcaaatgtgactgttcca
gtgaatatagacaagaggtttgtagtgctgctgaactcgtccgggttctacagttatgcc
atcttcgagaggctacaagggtggcctgctgttgaaattgataatattcgattagcaatt
aagctagacaaggacaagtttgattacatggcgatttcagatgagaggcaaaggtacatg
cctctaccagatgataggattccacctcgaggtaagcctcttgcttaccctgaggcagtt
cagctactcgaccctatcgagcctgagtttaaaggagaggtggatgacaagtatgaatac
tcaatggagagtaaagacataaaagttcatggatggataagcacaaatgactcagttggg
ttctggcagatcactccaagcaacgagttccgttctgctggtcctctcaagcagttccta
ggttcccatgtcggtccaaccaacctcgcgatatttcacagcactcactatgttggagca
gaactaatcatgagttttgaagaaggtgaagcatggaagaaagtgtttggacctgtcttt
atttatctcaactcttttcctaaggaagttgatcctctcttgctctggcatgaagccaag
aaccagacaaagattgaagaagagaagtggccttataacttcacaacttcaagtgatttt
cctgcatctgaccaaagaggatcctttactggtagattacttgttagagaccggtacata
agcagtgaggagatacctgcaaacggttcctacgtggggttagcttcaccaggagatgtt
gggtcatggcaaagagaatacaaaggttaccagttctggtcaaaggccgacgaagaagga
tacttttgtataaacaatgtgagaagtggtcgttacaatctctatgcgtttgttcctgga
ttcatcggtgattaccacaacgacaccgttttcgacgtttctccaggttcgaatatatgc
ctaggagagttggtgtatgaacctccaagagacggtccaactctatgggaaatcggtgta
ccggaccgaaccgctgcagagttctacattcctgaccctaacccgatgtttgtgaacaaa
ctatacgtaaacagttctgataataaatacagacaatatggattgtgggaacggtattca
gaactgtaccccgatgaagatatggtctacgacgttgatgttgatgattactctaaagat
tggttctacatgcaagtcacacggaagcgagatgatggaggatacaacggtactacatgg
gagatcaagtttgaattcgacgatcaagtgacaaatcttacgggagatttcaaactgcga
atcgctctagccacatcaaatgtagctgaactgcaggttcgggtgaaggatgtttctgtg
gatccaccattgtttacgacggggcaaataggaaaggataatacaattgcaagacatggt
attcatggactgtattggttgtacagtgtgaatgtgcctgcttcgtctcttggcctggga
tgcaactccatctatctaacacaaccgcttgccataagcccgtttcaaggactcatgtac
gattacattcgtctagagtatcctgattctgtttatcatatcacttag
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