Raphanus sativus (radish): 108806310
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Entry
108806310 CDS
T06014
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD1 isoform X1
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108806310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108806310
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rsz04147
]
108806310
Membrane trafficking [BR:
rsz04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
108806310
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
108806310
Exosome [BR:
rsz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
108806310
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank_2
Ank
PH
Ank_3
Ank_5
Ank_4
BAR
PH_8
PH_11
DUF6444
PH_20
PH_13
BAR_2
ANK_LRRK2
SOS1_NGEF_PH
Phlebo_G2_C
Motif
Other DBs
NCBI-GeneID:
108806310
NCBI-ProteinID:
XP_018433888
UniProt:
A0A6J0JE39
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Position
6:complement(13082115..13087903)
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AA seq
839 aa
AA seq
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MHFAKLDDSPMFRQQMQTMEESAELLRMRCLRFYKGCRKYTEGLGEGYDADIGFANALES
FGGGHNDPLCVAFGGPVMTKFTIALREIGTYKEVLRSQVEHLLNDRLLQFVNVDVQEVKE
ARKRFDKASIIYDQAREKYLSLRKSTRLDVAATIEEDLHSARTTFEQARFHLVSALSNAE
AKKRFEFLEAVSGTMDAHLRFFKQGYELLHQMEPFINQVLAYAHQSKECANYEMASLNEK
MQEYQRQVDRETRNSCGSPTGDGLRHNSRNSQKVIEAVMQSAAKGKVQTIRQGYLSKRSS
NLRGDWKRRFFILDSRGMLYYYRKPWNWSSNGSRSVVHRSMTSENSPGLLSRWLSSHYHG
GVHDEKPVARHTVNLLTSTIKVDADQTDLRFCFRIISPTKVYTLQAENAQDQMDWIEKIT
GVIASLLSFQTPERAIMHLSTVDGDTFSASDSGSLADPYDFEQAEGRDSIVENPMTGGNR
SRFSGCLQQHDMTKTEKPIDVLTRVLGNEKCADCGAPEPDWASLNLGVLICIECSGIHRN
LGVHISKVRSLTLDVKVWEPSVLTLFQSLGNVYVNSVWEELLNSSESRSSSASRSSGSTP
KADRPRKFLVRKPGFNDPISVKELFIHAKYSERIFVRKATDSQHFQAVFQEIWENVRAND
KKSVYKHIVCSEADVNALRGQASYTVSLPLAKMMQLDAKEETLAAKLKSIEEEFKEKPEG
CSKSRGGGGGGGGDGESMVREETSNDCSLLHLACLSADIGMVELLLQYGAKINATDSRGR
TPLHHCIISRRYAIARLLLMRGGDPNAVDKDSNTPVKYASETDLNDSELIALLTTDSKR
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcgctaagctcgatgattcccctatgttccgtcaacagatgcaaactatggaa
gagagtgcagagttgctgcgaatgcgatgcttaaggttctataaaggctgcagaaaatac
acggaagggcttggagaagggtatgatgcagatattggctttgcaaacgcacttgagtct
ttcggtggaggccataatgatcccttatgtgttgcctttggaggtcctgtaatgacaaaa
ttcacaattgctctacgagaaattgggacatacaaggaagttcttcgttctcaggtggaa
catctgctgaatgaccggttgcttcagtttgtgaatgttgatgtccaagaagtcaaggaa
gcacgtaaacggtttgataaagcttccattatatacgaccaggcacgagagaagtatctt
tcattaagaaagagtacacgattggatgtggctgcaacaatcgaggaggacttacatagc
gcaagaacgacgttcgagcaagcccggtttcatctggttagtgcactctctaatgcggaa
gctaagaagcggtttgagtttctggaagcagttagtgggactatggatgctcatctccgt
ttcttcaaacagggatatgagctgctgcatcaaatggagccttttattaaccaggtgttg
gcttatgcacaccagtccaaagaatgtgcaaactacgaaatggcgtcactcaatgaaaag
atgcaggaataccaaaggcaagttgatcgagaaactaggaactcatgtggttctccgaca
ggagatggcttgagacacaactcaagaaactcacaaaaagtcatcgaggctgtcatgcaa
tctgctgcaaaaggaaaagttcagaccataagacaagggtatctctctaaacgttcctca
aacctgagaggtgactggaaacgaaggttctttatccttgatagccgtgggatgctatac
tattaccgcaagccttggaactggtcttcaaatggaagcaggtctgttgttcataggagt
atgacttcagagaacagtccagggctgctaagtcgatggctgtcttctcactatcacggc
ggcgtgcacgatgagaagccagttgcacgtcacactgtcaatctgcttacctcaacgatt
aaagtcgatgcagatcagactgatctaagattctgcttccgtattatttcgccaacaaaa
gtctatacattgcaggcagagaatgcgcaagatcagatggattggatcgagaaaataact
ggagtgattgcttctttgctaagtttccaaacacctgaaagagcaatcatgcatctttct
acagtggatggagacactttctctgcgagtgattcaggctctttagcagatccgtacgat
ttcgagcaggcggaaggcagagactccatagtggagaatcccatgacaggaggaaaccgt
tcgaggttctcagggtgcttgcagcagcatgatatgacaaagaccgagaagccaattgat
gtgttgacaagagtgttggggaatgagaaatgtgcagattgtggtgctcctgagcctgat
tgggcctctttgaatctcggtgtcctcatatgtattgagtgttctggtatacatcgtaac
ctcggtgttcacatttcaaaggtcagatcgctcacacttgatgttaaagtatgggaacca
tcggtgctgacgttattccagtcgttaggtaacgtatatgtaaactcagtgtgggaggaa
ttgttgaactcatcagagagtagatcctcaagtgctagtaggtcttcaggtagcactccc
aaggcagatcgaccaagaaagtttcttgtaaggaaacctggtttcaatgatcccatctct
gtgaaagagctgttcatccacgcaaagtactcagagaggatatttgtccgaaaagcgaca
gacagtcagcatttccaagcagtattccaagagatttgggagaatgtgcgagccaacgac
aagaaatcagtttacaaacacattgtctgctctgaagcagatgtgaatgcactacgcgga
caagcgtcctacacggtgtctttgcccttggcaaagatgatgcaactggacgccaaggag
gaaacccttgcagccaagttgaagagcattgaagaggagtttaaagagaagccagaaggg
tgttctaagtcaagaggaggaggaggaggaggaggaggagacggggagagtatggtcaga
gaagaaacttcaaacgactgctctttgcttcaccttgcttgtctctctgcggatataggt
atggtggagttgttgcttcagtacggtgcgaaaataaatgcaacagactcgagaggtcgg
accccgcttcatcattgtatcatcagcaggagatacgctattgcaaggttgcttctaatg
aggggaggagatccaaatgctgtggataaagacagcaacacaccagtcaaatatgcttca
gagacggatctcaatgacagtgaactaattgctttattaacaacagactccaaaagatga
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