KEGG   Raphanus sativus (radish): 108806314
Entry
108806314         CDS       T06014                                 
Name
(RefSeq) small RNA degrading nuclease 1
  KO
K14570  RNA exonuclease [EC:3.1.-.-]
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    108806314
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:rsz03009]
    108806314
Ribosome biogenesis [BR:rsz03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    108806314
SSDB
Motif
Pfam: RNase_T DNA_pol_A_exo1 RRM_1 Hom_end PIN_TASOR SET_assoc
Other DBs
NCBI-GeneID: 108806314
NCBI-ProteinID: XP_018433894
UniProt: A0A6J0JGB6
LinkDB
Position
6:complement(39701517..39705213)
AA seq 411 aa
MELKLATSEKQVLEELVKLAQSLGLRGENGAWKEFLDAKDKKTGSPNDPSKRSRDELVSF
LTTFNKTQDLQVLKYHANCLLIEKLEEESPDDESPEQSLVRLTLDHPAYSLDYSFQPHTE
DWFVSDVGMKTSKVMESTEMVAVDCEMVLCDDGTEGLVRVGAVDRHFKVILDEFVKPDKP
IVDYRTDITGITAQVIEKATLSLVDIQETLQPFLSNGAILVGHSLNKDLEVLKIDHPKVI
DTSLVFKYSNARRPKRASLNNLCKSILGYEVRKAGVSHDCVHDATAAMKLALAVIEKRAN
TTIPPSKEMLEVERAKLFIHKIPHNVTSKELEQVLSGEFTLDVKPAKTSRGCYCAFAVFH
SSKEADQAFQNVDGDQGQDSFGLPQKLVIFKLTSGSRVSIYVRKMVQDGSA
NT seq 1236 nt   +upstreamnt  +downstreamnt
atggagcttaaactagccacgtccgagaaacaagtgcttgaagagttagtgaagctagca
cagagcctaggcctgcgcggcgaaaatggagcatggaaggagtttttagatgctaaagac
aagaagactggatcaccaaatgacccttcgaagcgttcccgtgacgaacttgtctccttt
ctcacaaccttcaacaagacacaagatttgcaggttctgaaatatcacgccaattgtctt
ctaattgagaagttggaggaggaatctcctgatgatgaatctcctgaacagagtctagtt
cgattgactcttgaccatcctgcttactctcttgactattcattccagccacataccgag
gactggtttgtatccgatgtcggaatgaagacgtccaaggtgatggaatcaaccgaaatg
gtggctgttgactgtgagatggttctttgcgacgatggaactgagggtttggtcagagtt
ggtgctgtcgaccgccattttaaggtgattcttgacgagtttgtgaaaccggacaaacct
atagttgactataggaccgacattacggggattactgctcaagttatcgaaaaagctacc
ctctccctcgttgatattcaggagactttgcagccatttctttcaaacggtgcgattctg
gttggtcacagtttgaacaaagacttggaagtgttgaagatagatcatcccaaagtaatc
gacacctcacttgtattcaagtattcaaatgcaagaaggcccaaaagagcttcacttaac
aacctttgcaagtctattttgggttatgaagtccgaaaggcaggagtctctcatgattgt
gtacacgacgcaactgctgcgatgaaacttgcacttgctgttattgagaaaagggctaac
acaactatcccaccatctaaagagatgttggaggttgagagagcaaagctttttatacat
aaaatccctcacaatgtgacatctaaagagctggagcaagttctttctggagagtttaca
cttgatgttaagccagcaaagacatcgagaggttgctattgtgcgtttgctgttttccat
agctcaaaagaagcagatcaagcgtttcaaaacgttgatggagaccaaggacaggattca
tttggtttgccacaaaaactggttatatttaagctgacttctggttcaagagttagtata
tatgtccgtaaaatggttcaagatggttccgcttag

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