Entry |
|
Name |
(RefSeq) small RNA degrading nuclease 1
|
KO |
K14570 | RNA exonuclease [EC:3.1.-.-] |
|
Organism |
rsz Raphanus sativus (radish)
|
Pathway |
rsz03008 | Ribosome biogenesis in eukaryotes |
|
Brite |
KEGG Orthology (KO) [BR:rsz00001]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108806314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:rsz03009]
108806314
Ribosome biogenesis [BR:rsz03009]
Eukaryotic type
Pre-60S particles
RNases
108806314
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
6:complement(39701517..39705213)
|
AA seq |
411 aa
MELKLATSEKQVLEELVKLAQSLGLRGENGAWKEFLDAKDKKTGSPNDPSKRSRDELVSF
LTTFNKTQDLQVLKYHANCLLIEKLEEESPDDESPEQSLVRLTLDHPAYSLDYSFQPHTE
DWFVSDVGMKTSKVMESTEMVAVDCEMVLCDDGTEGLVRVGAVDRHFKVILDEFVKPDKP
IVDYRTDITGITAQVIEKATLSLVDIQETLQPFLSNGAILVGHSLNKDLEVLKIDHPKVI
DTSLVFKYSNARRPKRASLNNLCKSILGYEVRKAGVSHDCVHDATAAMKLALAVIEKRAN
TTIPPSKEMLEVERAKLFIHKIPHNVTSKELEQVLSGEFTLDVKPAKTSRGCYCAFAVFH
SSKEADQAFQNVDGDQGQDSFGLPQKLVIFKLTSGSRVSIYVRKMVQDGSA |
NT seq |
1236 nt +upstreamnt +downstreamnt
atggagcttaaactagccacgtccgagaaacaagtgcttgaagagttagtgaagctagca
cagagcctaggcctgcgcggcgaaaatggagcatggaaggagtttttagatgctaaagac
aagaagactggatcaccaaatgacccttcgaagcgttcccgtgacgaacttgtctccttt
ctcacaaccttcaacaagacacaagatttgcaggttctgaaatatcacgccaattgtctt
ctaattgagaagttggaggaggaatctcctgatgatgaatctcctgaacagagtctagtt
cgattgactcttgaccatcctgcttactctcttgactattcattccagccacataccgag
gactggtttgtatccgatgtcggaatgaagacgtccaaggtgatggaatcaaccgaaatg
gtggctgttgactgtgagatggttctttgcgacgatggaactgagggtttggtcagagtt
ggtgctgtcgaccgccattttaaggtgattcttgacgagtttgtgaaaccggacaaacct
atagttgactataggaccgacattacggggattactgctcaagttatcgaaaaagctacc
ctctccctcgttgatattcaggagactttgcagccatttctttcaaacggtgcgattctg
gttggtcacagtttgaacaaagacttggaagtgttgaagatagatcatcccaaagtaatc
gacacctcacttgtattcaagtattcaaatgcaagaaggcccaaaagagcttcacttaac
aacctttgcaagtctattttgggttatgaagtccgaaaggcaggagtctctcatgattgt
gtacacgacgcaactgctgcgatgaaacttgcacttgctgttattgagaaaagggctaac
acaactatcccaccatctaaagagatgttggaggttgagagagcaaagctttttatacat
aaaatccctcacaatgtgacatctaaagagctggagcaagttctttctggagagtttaca
cttgatgttaagccagcaaagacatcgagaggttgctattgtgcgtttgctgttttccat
agctcaaaagaagcagatcaagcgtttcaaaacgttgatggagaccaaggacaggattca
tttggtttgccacaaaaactggttatatttaagctgacttctggttcaagagttagtata
tatgtccgtaaaatggttcaagatggttccgcttag |