Raphanus sativus (radish): 108806335
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Entry
108806335 CDS
T06014
Name
(RefSeq) SEC12-like protein 1
KO
K14003
prolactin regulatory element-binding protein
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108806335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rsz04131
]
108806335
Membrane trafficking [BR:
rsz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
108806335
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_EML_2
WD40
Beta-prop_WDR5
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WDR55
ANAPC4_WD40
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_Vps41
Beta-prop_TEP1_2nd
NBCH_WD40
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
WDR90_beta-prop_4th
Beta-prop_Aladin
Beta-prop_VPS8
eIF2A
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
108806335
NCBI-ProteinID:
XP_018433927
UniProt:
A0A6J0JE73
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Position
6:38749857..38752968
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AA seq
397 aa
AA seq
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MEKEEASRGESGHVVCGSWIRRPKKVNWAIIARAAKRRGSSSPALLHIFSFDPITTSLSS
SPLATHELKESDGDPIAISVHPGGDYFVCSTSKGGCKLFEIVGGATGVTILAKELPPLQN
AGLQKCMAFSFDGSKLATGGVDGCLRIMEWPNLSVILDEPKAHKSIRDMDFSLDSEFLAT
TSTDGSARIWKAEDGFPLSTLERSGDENIELCRFSKDGTKPFLFCAAQRGDVPVVNVYDI
STWKKLGFKKLSRKNASTMAVSLDGKYIALGGKDGDISVAEVKTMEIYHYSKRLHLGQTI
ASLEFCPSERVMLTTSSEWGEMVTELTVPKEWKEWQIYALLFCLFMASVVLAYVFFENSD
SFWKLPMGKDQRRPKISLFGGSSSTPAEDHNKWNLDL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggagaaagaagaagcgagtcgtggggaaagtgggcatgtggtgtgcggatcatggatt
cgtcgccccaagaaagtcaactgggccatcatcgccagagctgccaaacgccgtggctcc
tcctctcctgccctccttcacatcttctctttcgatcccatcaccacttccctctcctcc
tctcccttggcaacacatgagcttaaggagagtgatggtgatcctatagcaatctctgtg
catcctggtggtgattattttgtttgctctacctccaaaggtggttgcaagttgtttgag
atcgtgggaggagcaacaggtgttacaatcttagccaaagaactccctcctcttcagaat
gctgggctacaaaaatgtatggccttcagctttgacgggtctaaactagctactggagga
gtggatgggtgtctaagaataatggagtggccaaacctaagtgtaattttggatgagcca
aaggcacacaaatccatccgggacatggattttagtcttgactcagagttcttagccaca
acatcaactgatgggtcagctaggatatggaaagcagaagatggttttcctttgtcaact
ttggaacgtagtggggatgaaaatattgaactgtgccggttctctaaagatggaacaaaa
ccctttctgttctgtgctgctcaaagaggtgatgttcctgtggtcaatgtttacgacatt
agtacatggaagaagcttgggttcaagaagctgtcaaggaagaatgcatcgacgatggca
gtgagcttggatggcaaatatattgctttgggtggcaaagatggagatatatctgtagct
gaagtgaagacaatggagatataccattacagtaagaggctgcatcttggtcaaaccatt
gcttcacttgagttctgccctagtgaaagggtgatgctgacaacatcgagtgaatggggt
gagatggtgaccgaactcactgtaccaaaggagtggaaagagtggcagatatatgcgctg
ttgttttgcttgttcatggcatcagtggtacttgcatacgtgttcttcgagaactcagat
tcgttttggaagttgccaatgggaaaagatcaaagaagaccaaagataagtctctttgga
ggttcatcctctacgcctgccgaggatcataacaagtggaacttggacctatag
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