KEGG   Raphanus sativus (radish): 108806335
Entry
108806335         CDS       T06014                                 
Name
(RefSeq) SEC12-like protein 1
  KO
K14003  prolactin regulatory element-binding protein
Organism
rsz  Raphanus sativus (radish)
Pathway
rsz04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:rsz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108806335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:rsz04131]
    108806335
Membrane trafficking [BR:rsz04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    108806335
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_Prp19 Beta-prop_EML_2 WD40 Beta-prop_WDR5 WD40_WDHD1_1st EIF3I Beta-prop_WDR3_1st WD40_CDC20-Fz WDR55 ANAPC4_WD40 Beta-prop_WDR3_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_Vps41 Beta-prop_TEP1_2nd NBCH_WD40 Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_1st Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_VPS8 eIF2A Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 108806335
NCBI-ProteinID: XP_018433927
UniProt: A0A6J0JE73
LinkDB
Position
6:38749857..38752968
AA seq 397 aa
MEKEEASRGESGHVVCGSWIRRPKKVNWAIIARAAKRRGSSSPALLHIFSFDPITTSLSS
SPLATHELKESDGDPIAISVHPGGDYFVCSTSKGGCKLFEIVGGATGVTILAKELPPLQN
AGLQKCMAFSFDGSKLATGGVDGCLRIMEWPNLSVILDEPKAHKSIRDMDFSLDSEFLAT
TSTDGSARIWKAEDGFPLSTLERSGDENIELCRFSKDGTKPFLFCAAQRGDVPVVNVYDI
STWKKLGFKKLSRKNASTMAVSLDGKYIALGGKDGDISVAEVKTMEIYHYSKRLHLGQTI
ASLEFCPSERVMLTTSSEWGEMVTELTVPKEWKEWQIYALLFCLFMASVVLAYVFFENSD
SFWKLPMGKDQRRPKISLFGGSSSTPAEDHNKWNLDL
NT seq 1194 nt   +upstreamnt  +downstreamnt
atggagaaagaagaagcgagtcgtggggaaagtgggcatgtggtgtgcggatcatggatt
cgtcgccccaagaaagtcaactgggccatcatcgccagagctgccaaacgccgtggctcc
tcctctcctgccctccttcacatcttctctttcgatcccatcaccacttccctctcctcc
tctcccttggcaacacatgagcttaaggagagtgatggtgatcctatagcaatctctgtg
catcctggtggtgattattttgtttgctctacctccaaaggtggttgcaagttgtttgag
atcgtgggaggagcaacaggtgttacaatcttagccaaagaactccctcctcttcagaat
gctgggctacaaaaatgtatggccttcagctttgacgggtctaaactagctactggagga
gtggatgggtgtctaagaataatggagtggccaaacctaagtgtaattttggatgagcca
aaggcacacaaatccatccgggacatggattttagtcttgactcagagttcttagccaca
acatcaactgatgggtcagctaggatatggaaagcagaagatggttttcctttgtcaact
ttggaacgtagtggggatgaaaatattgaactgtgccggttctctaaagatggaacaaaa
ccctttctgttctgtgctgctcaaagaggtgatgttcctgtggtcaatgtttacgacatt
agtacatggaagaagcttgggttcaagaagctgtcaaggaagaatgcatcgacgatggca
gtgagcttggatggcaaatatattgctttgggtggcaaagatggagatatatctgtagct
gaagtgaagacaatggagatataccattacagtaagaggctgcatcttggtcaaaccatt
gcttcacttgagttctgccctagtgaaagggtgatgctgacaacatcgagtgaatggggt
gagatggtgaccgaactcactgtaccaaaggagtggaaagagtggcagatatatgcgctg
ttgttttgcttgttcatggcatcagtggtacttgcatacgtgttcttcgagaactcagat
tcgttttggaagttgccaatgggaaaagatcaaagaagaccaaagataagtctctttgga
ggttcatcctctacgcctgccgaggatcataacaagtggaacttggacctatag

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