Raphanus sativus (radish): 108806384
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Entry
108806384 CDS
T06014
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 19
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
rsz
Raphanus sativus (radish)
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rsz01002
]
108806384
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rsz04121
]
108806384
Enzymes [BR:
rsz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108806384
Peptidases and inhibitors [BR:
rsz01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
108806384
Ubiquitin system [BR:
rsz04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
108806384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Glyco_hydro_120_ins
DUF3052
Motif
Other DBs
NCBI-GeneID:
108806384
NCBI-ProteinID:
XP_056844642
UniProt:
A0A9W3BZG6
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All DBs
Position
6:42573681..42577161
Genome browser
AA seq
654 aa
AA seq
DB search
MHEVGLTWDLNFFTQLLLTLFFLSIGLLFFVKRTAAKYFDAGASGGFDSYHRRDSMVPDT
AECHVCGKLTTKKCSRCKSVRYCSAECQKSDWNSGHKRQCKVFKSSDSSSPVRRDHHDLD
FKASLFGNNSASAPPKLMSQSKAVVVKPGDVLFPYETFVNYFNWDKPTLAPCGLTNCGNS
CFANVVLQCLSWTRPLVAYLLERGHKRQCRRNDWCFFCEFETHLERANMSRFPFSPMNII
SRLPNIGGNLGYGRQEDAHELMRFVIDMMQSVCLDEFGGEKVVPPSAQETTLIQHIFGGL
LQSQVQCTVCSNVSDQYENMMDLTVEIHGDAISLEECLDQFTAKEWLQGDNLYKCDRCND
YVKACKRLSIRSAPNILTIALKRFQGGRFGKLNKRIGFPETIDLGPYTSGGGEGSDVYNL
YAVIVHLDMLNASFFGHYICYVKDFRGDWYRTDDSEVEKVELEDVLSQRAYMLLYSRVQT
RPSSLRPEEVQDEKKTDALKTESSQDSSVESSGEGVTDTSVSSLCNGIISHSEGSSPSSS
VTVSEKEGEVAERVDTLDSESNPSIDMEHDSGTDHQEEGEAAKGKENPTVEEPAVDSSSC
SDNTASSPSAATENPTVEDPACSDIATSSPSAAIKSKHQEEKEDSDTKMIDDAH
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaagttggattaacgtgggatctcaatttcttcacgcagcttctactcaccctc
ttcttcctctccatcggcctcctcttcttcgtcaaacgaacggccgccaagtacttcgac
gccggcgcctccggtggtttcgacagctaccaccgccgagattccatggttcccgacacg
gctgaatgccacgtctgcgggaagctcaccaccaagaagtgctctcgttgcaaatccgtt
cgatactgctctgcggagtgccaaaagtcagactggaactcagggcataaacgacaatgc
aaggtgtttaagagttctgactcgtcatcacccgtgagaagggatcatcatgatctcgat
ttcaaagcttctctctttgggaataactctgcatcggctcctcctaagctaatgagccaa
agcaaagctgtcgtcgtcaagccaggagatgttcttttcccatacgagacttttgttaac
tattttaactgggacaaacctacattggctccttgtgggctcaccaattgtggaaacagt
tgtttcgccaatgtggttctacaatgcctttcatggacacgccctcttgttgcctaccta
ctggagagaggccacaagagacaatgtaggcgcaatgattggtgcttcttctgtgaattt
gaaactcatctcgaaagagcaaacatgagccggtttcccttttcaccaatgaacattatc
tcccggttgcctaacattggtggcaatcttgggtatgggagacaggaagatgctcatgag
ttgatgaggtttgtaattgacatgatgcaatctgtttgcctcgatgaatttggtggagaa
aaagtggtgcctcctagtgcccaagaaacaacacttatccaacacatatttggcggtctc
cttcagtcacaggtccagtgtactgtttgcagtaatgtttctgatcagtatgaaaatatg
atggatttaactgttgagatccacggggatgcgatatctttggaggaatgtctcgatcag
ttcactgctaaagagtggcttcagggagataacctttacaaatgtgatagatgtaatgac
tatgtgaaggcatgtaagcgcctttcaattcgttctgctcctaatattcttacaattgcc
ttgaaaagattccagggtgggaggtttggtaaactgaacaaaagaattggttttcccgag
acaattgatcttggcccttacacgagcggtggaggggaaggttcagatgtgtacaatctt
tacgctgtgattgtccacttagatatgttgaatgcctctttttttggtcactacatttgc
tacgtgaaggacttccgaggagactggtaccgaacagacgattctgaggttgaaaaggtt
gaactagaagatgtcctttctcaacgagcatacatgctcctctacagcagggttcagacc
agaccatcaagccttagacccgaagaagttcaagatgaaaagaaaacagatgcattaaaa
acagaatctagccaagacagctctgttgagagttctggggagggagtaactgacacgagt
gtgtcctcgctgtgtaacggcatcatctcacattcagaaggatcatcaccttcgtcatct
gtaactgtctctgaaaaagaaggggaagttgccgaaagggttgatacgttagattctgag
tcaaacccttctattgacatggaacatgattctggaacagatcatcaagaagaaggagaa
gcagcaaaagggaaagaaaatccaacggttgaagaaccggctgttgattcttcttcttgt
tcggacaatactgcttcatccccttctgctgctacagaaaatccaacggttgaagatcct
gcttgttcggacattgctacttcatctccatctgctgctataaagtccaagcaccaggag
gagaaagaagattcagacaccaagatgattgatgatgctcattga
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