Raphanus sativus (radish): 108806432
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Entry
108806432 CDS
T06014
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
rsz
Raphanus sativus (radish)
Pathway
rsz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rsz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108806432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rsz03041
]
108806432
Spliceosome [BR:
rsz03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
108806432
Complex B
108806432
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RRM_10
Calcipressin
xRRM
DUF4523
Motif
Other DBs
NCBI-GeneID:
108806432
NCBI-ProteinID:
XP_018434053
UniProt:
A0A6J0JEK2
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All DBs
Position
6:53551275..53552874
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AA seq
262 aa
AA seq
DB search
MEMMMMQEQEEAAANKAGSEVSSPNQTIYINNLNEKVKLDELKKSLNAVFSQYGKIVEVL
AFKTLKHKGQAWVVFDNPESASNAISKMNGFPFYDKPMRIQFAKTKSDVIAKADGTFVPR
EKRKRHEEKGGKKKKEQHHDNTRMPIPPYPGVYGSAPPLSQVPYPGGGGGGGGGGVKSNL
PEAPAPPNNILFVQHLPHDTTPERLQELFGNYHGFKEVRMVAAKPGIAFVEFADEMQSTA
AMHGLEGFTIHQTPMHITYAKK
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggagatgatgatgatgcaggagcaggaggaggcggcagcaaataaagctggatcggag
gtgtcttctccaaaccagacgatttacatcaataatctcaacgaaaaagtcaagctcgat
gagctgaagaagtcgctaaatgcggtgttctcgcagtacgggaagatagtggaggtgttg
gcgtttaagacattgaagcacaaagggcaagcttgggttgtgttcgacaatcctgaatct
gcttccaatgctatttccaagatgaatggattccccttctacgacaaacccatgagaata
caatttgctaaaacgaaatcagatgttattgccaaggctgacggcacctttgttcctcgc
gagaaacgaaagcgacacgaggagaaaggtggtaagaaaaagaaagagcagcaccatgat
aatacacgtatgcccatcccaccatatcctggtgtctatggatctgcccctcctctttcg
caagtaccataccctggtggtggtggtggtggtggtggtggtggtgtcaaaagcaatctt
cccgaggcacccgcacccccaaacaacatcctctttgtccaacaccttcctcacgacaca
actcctgagaggcttcaggaactcttcggcaattaccatggcttcaaggaggttaggatg
gttgctgccaagccaggtattgctttcgttgagtttgctgatgagatgcagtctaccgct
gctatgcacggtcttgaaggtttcaccattcaccaaacccctatgcacatcacctatgct
aagaaataa
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